Oryza brachyantha (malo sina): 102718250
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Entry
102718250 CDS
T02995
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03020
RNA polymerase
obr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102718250
09124 Replication and repair
03420 Nucleotide excision repair
102718250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102718250
03400 DNA repair and recombination proteins [BR:
obr03400
]
102718250
Enzymes [BR:
obr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102718250
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102718250
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102718250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
102718250
NCBI-ProteinID:
XP_006650345
LinkDB
All DBs
Position
3:20681152..20689702
Genome browser
AA seq
1219 aa
AA seq
DB search
MEDDEYEEGMEMGGHHHPHHGSGGYGADEYGGGEEMEDDEAEGDGPDEEEITQEDAWAVI
SAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHKISF
GQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHDCEEVTETMEY
PKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNH
VYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPYIRA
DIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRG
ATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRRAEDDR
DHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITSGLK
YSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHW
GMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEISPAVIPQAAK
IFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRPLFI
VENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISMTINDLVNARH
NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLR
MDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDR
GFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGE
DVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRS
VRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLIECI
MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLSAMIFLGPT
YYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFLKER
LFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMA
IAPRMLTNDNKTGKDQKRR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgagtacgaggaggggatggagatgggcgggcaccaccacccccaccat
ggcagcggcgggtacggcgccgacgagtacggcggcggggaggagatggaggacgacgag
gcggagggggacggccccgacgaggaggagatcacccaggaggacgcgtgggccgtcatc
tccgcctacttcgaggagaagggcctcgtccgccagcagctcgactccttcgacgagttc
atccagaacaccatgcaggagatcgtcgacgagtccgccgacatcgagatccgccccgag
tcgcagcacaaccccggccgccaggccgagttcgccgagacactccacaagatcagcttt
ggacaaatctatctgagcaagccaatgatgacagaagctgatggagagacagctactctg
tttccgaaatcagcaagactcagaaatctgacatactcagcgccactatatgttgatgta
tcatacagggttatgaaaaaaggacatgactgtgaagaagttacagaaactatggagtac
ccaaaagtcttcattggaaaggttcccatcatgttgcgttctagttactgcacactgttt
caacagtctgaaaaggatctcacagaacttggagagtgcccttatgaccaaggagggtat
tttataatcaatggtagtgaaaaagttcttattgcccaggagaagatgagcaccaaccat
gtctatgtgtttaagaagaggcagcctaataaatatgcatatgtggctgaagtccgctct
atggcagagaatcagaatagaccagctagtagtatgtttgtacggatgctttctagggca
ggcgcaaaagggggttcatctggtcagtatatccgtgctactttgccctatattcgtgca
gacattccgatcatcatcgtgttccgagcattaggatttgttgctgataaagatatattg
gagcacatatgctatgatttctctgatacacaaatgatggagttgctgcgcccatcttta
gaggaagctttcgtcattcaaaatcagcaggttgctctggattacattggaaagcgtgga
gctacagttggtgtaactcgagaaaagaggattaagtatgccaaagagatacttcaaaaa
gaaatgttaccccatgttggtgtgggtgaattctgtgaaactaaaaaagcatactacttt
ggatacattattcatcgtctactgatgtgcgctcttggtcgaagagctgaagatgacaga
gatcattatggcaacaaaaggctggaccttgcaggtccattgcttggaggactctttaga
atgctattcaggaaattgacaagggatgtgaggtcatacgtgcaaaagtgtgtggataat
ggcaaggaagtcaatttgcaatttgctattaaagccaaaaccattactagcgggttgaag
tattcccttgctactggaaactggggacaggctaaccaagctggtaccagggctggtgtt
tctcaggtgcttaatcgccttacgtatgcatctacattatctcatctgcggaggttgaac
tctccaatcgggcgtgaagggaaattggcaaaacctcgtcaattgcataattctcactgg
ggaatgatgtgtcctgctgaaacccctgagggacaagcttgtggtttggttaaaaatctt
gccttgatggtatatatcactgttggttctgctgcaaatcctattttggaatttttggag
gagtggggtacagaaaattttgaggagatatcaccagcagtcattccgcaagctgcaaaa
atttttgtcaatggttgttgggttggaattcacagaaaccctgacctgttggtgaagacc
cttaggcgtttgagaagacagattgatgtcaacactgaagttggtgtggttcgtgatatc
cgtctgaaagagctcagactttatacagactatggacgctgcagtcgtccattgttcatt
gttgaaaaccaaaggcttcttattaaaaagaaacatatccgagcattgcagcaaagggag
actcctgaagaaggttggcatgacttagttgctaaaggatttattgagtacatagatact
gaagaggaagaaactactatgatttccatgaccattaatgatcttgtaaatgctcgacac
aatccagaggaggcatactctgaaacttacactcattgtgagattcatccttcattgata
cttggtgtttgtgcctcaattattccttttccggatcacaaccagtcgcctcgtaataca
tatcaatctgctatgggaaaacaagcaatgggaatctatgttactaattatcagttaaga
atggacacattggcctatgtgctatattacccacaaaagcctcttgttaccactcgtgct
atggaacatttgcacttcaggcagttaccagctggcattaatgcaattgttgctattgca
tgctactctggatataatcaagaagattcagttattatgaaccaatcttcaatagaccgt
gggttcttccgatctctatttttccgctcgtacagagatgaggaaaagaagatggggact
cttgtgaaagaggagtttggccgtccaaatagggagaataccatgggaatgcgccatggg
tcatatgataaactagatgatgatggacttgcaccaccaggtacaagggtatctggtgaa
gatgtcattattgggaagacatctcctattccacaagatgatgcccaagggcaagctacc
agatacactaagcgtgatcacagtacttctctgcgccacagtgaaagtgggatggtggat
caggttctgctaacaacaaatgctgatggtttaagatttgtgaaagttagaatgcgatca
gttcgcataccacaaattggagataagtttagtagtaggcatggtcagaaaggaactgtt
ggaatgacttatacacaggaggacatgccgtggactattgaaggcatcacacctgatatt
attgtgaatccacatgctattccgtcccgtatgactattggtcagctgattgagtgtatt
atgggtaaagttgctgctcacatgggaaaagaaggagatgcaactcctttcactgatgtt
actgtggataatatcagcaaagcactccataaatgtggttatcagatgcgtggatttgag
accatgtacaatggtcacactggaagaaaattaagtgcaatgattttccttggccctact
tattaccagagacttaagcacatggtggatgacaagatccactctagaggccgtggtccc
gtgcagatacttaccaggcaacctgcagaggggcgctctcgtgatggtggtctccgcttc
ggagagatggagagggactgcatgattgctcatggcgcagcatttttcctaaaggaaagg
ttattcgatcaaagtgatgcatacagagtccatgtatgtgagaaatgtgggcttattgct
attgctaatctcaagaagaattctttcgagtgcagaggctgcaagaacaaaactgacatt
gtccaagtacatataccatatgcgtgtaagcttctgttccaggagctcatggcgatggct
atcgctccgaggatgctcaccaatgataacaaaactgggaaggatcagaagaggcgctaa
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integrated database retrieval system
