Oryza brachyantha (malo sina): 102718452
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Entry
102718452 CDS
T02995
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102718452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obr02000
]
102718452
Transporters [BR:
obr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
102718452
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GFIT
Motif
Pfam:
Aa_trans
DUF7185
Motif
Other DBs
NCBI-GeneID:
102718452
NCBI-ProteinID:
XP_040379150
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Position
4:12002414..12003850
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AA seq
399 aa
AA seq
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MAVGAGNFVRTCINGLNALSGVGLLTVPYALSEGGWVSLALLATVAAACWNTGILLSRCM
DADDAIRTYPDIGERAFGRAGRLLVSGFIYAELYLVATGFLILEGDNLDKLFPGAAVSLG
TVSLAGKQLFIVLGALAVTPTTWLRSLGVLAYVSATGVFASVVIVLSVLWAAAVDGVGFS
GRGTTTPLRTTGLPTALGLYIFCYGGHPVFPTLYTSMKRKSQFRKMLVICFVLCTLNNGA
MAVLGYLMYGDGVLSQVTLNLPAARLSSKVAIYTTLLTPFSKYALLVTPIAAAVEERIRG
CVGEGAAVSVAVRTLLVLSTLVVALAVPFFADLMALVGSLLNAAVCMLLPCACYVRIFGP
PPSISRWEAAAIGGILALGSLVAVTGTYSSVAKIIHQLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcggttggcgccggcaacttcgtgcgaacttgcatcaatggcctcaatgccctgtca
ggggtgggcttgctcaccgtgccctacgcgctctccgaggggggctgggtgagcctggcg
ctgctagccaccgtggccgccgcctgctggaacaccgggatcctcctcagccgctgcatg
gacgccgacgacgccatccggacgtacccggacatcggcgagcgcgccttcggccgcgcc
ggccgcctcctcgtgtcgggcttcatatacgccgagctctacctcgtcgccacgggtttc
ctcatcctcgagggcgacaacctcgacaaactcttccccggcgccgccgtcagcctgggg
accgtgtccctcgccgggaagcagctgttcatcgtgctcggcgctctcgcggtcacgccc
accacgtggctccgcagcctcggcgtgcttgcgtacgtctcggcgacgggcgtgttcgcg
tccgtcgtcatcgtgctcagcgtgctgtgggccgcggccgtcgacggtgtcgggttctcc
ggacgagggacgacgacgccgctacggaccaccgggctcccgacggccctcgggctgtat
atcttctgctacggcggacaccccgtcttcccgacgctgtacacctctatgaagaggaag
tctcagtttcgaaagatgctagtgatatgcttcgtgctgtgcacgctcaacaacggtgca
atggcggtgcttggctacctcatgtacggcgacggcgtgctgtcccaggtgacgctgaac
ctccccgcggcgaggctcagttccaaggtcgccatatacacgacgctgctcaccccgttc
tccaagtacgcgctgctggtgacgccgatcgcggctgccgtcgaggagaggatccgcggc
tgcgtcggcgagggagcggccgtctccgtggcggtgaggacgctgctggtgctcagcacg
ctggtcgtggcgctcgcggtgcccttcttcgcggacctcatggcgctggtggggtcgctg
ctcaacgcggccgtgtgcatgctgctgccctgcgcctgctacgtcaggatcttcgggccg
ccgccgtcgatcagccgctgggaggctgcggcgatcggcgggatactggcgctgggctcg
ctggtggctgtcacggggacttactcttccgtggcgaaaattatccaccagttgatatga
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