Oryza brachyantha (malo sina): 102718533
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Entry
102718533 CDS
T02995
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102718533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102718533
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102718533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
INTS7_N
Motif
Other DBs
NCBI-GeneID:
102718533
NCBI-ProteinID:
XP_015690438
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All DBs
Position
3:2906863..2912714
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AA seq
926 aa
AA seq
DB search
MMGPGRCKRQKHESRRGSSSLLQSLSSIVSHNRTVCLQFLEQLNDFKYGSATGDYNAISM
KRLELINALQKLQEVPIQLPYASPQNSSEAKLGLGQNGRSSSCPITVDLDADDAADSACD
NVDSIGANVTVILVDSDEDSVTSFADENSSGSKQSANYIQKGVMSEQPVDHQEITMLDNE
NISSEAQVIVKKGKDSMDINDAFHSKSGHEETGKEEREAESVQIKETLKKEIISIADSGE
LPCEVQSQSLTNGNINQNDSSNPVDDLEGLWMDMSLAMACSKSIGSNHNIVPSENSCEQE
EDDCHHDFLMKDDLGIVCRICGLIQQCIENIFEYQWKKRKQSYRAHPSEHRNSSDADAIN
NTPGAILKVVPDALSIHPQHSQQMKPHQVEGFNFLIKNLADENNPGGCILAHAPGSGKTF
LIISFVHSFLAKYPDGRPLIILPKGILSTWRTEFLRWQVDDVPLYDFYSSKADKRSEQLK
VLKLWEDSRSILLLGYQQFACIVSDHSSDTEAIMCQEKLLKVPSLVILDEGHTPRNEETD
LLTSLENIQTPRKVVLSGTLFQNHVREVFNILKLVRPKFLKMNRSRAIVKRILSKVDLLG
KSARSKNVSDKDFFDLVQEHLQKDGNDKMRVMIIQNLRELTADVLHYYQGQLLEELPGLV
DFTVFLNMSSKQEEMIKGLDGINKFARRSKCSAISLHPCLKNAHRADEDGGNVTYKNNIG
SVICGIDIDDGAKAKFIHNLLSLSEATGEKVLVFSQYVRSLLFLEKLVARTKGWKPEVHT
FRVTGGSTQDQRERAVRRFNGSRDARVFFGSIKACGEGISLVGASRVVVLDVHENPSVTR
QAIGRAFRPGQSRPVYCYRLVAAGSPEEEDHRTAFKKERVSKLWFEWNELCGSGDFELAT
VDVSDSEDRFLESPALKQDIKALLKR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtcctggtagatgcaaaaggcagaagcatgaaagtcggcgtggtagctcatcg
ctactccaatccctgtcaagcatcgtcagtcataacagaactgtgtgccttcagtttctt
gagcaattaaatgactttaagtatgggagtgccacgggagattacaacgcgatcagtatg
aagcggctcgaacttatcaacgccctacaaaagcttcaagaagtacctatccagttgcct
tatgccagtccacagaattcatcagaagcaaaacttggccttgggcaaaacgggaggagc
tctagttgtcctattacagttgacttggatgcagacgatgctgcagacagtgcctgtgat
aatgtggacagcatcggtgctaacgtaaccgtaattttagttgattctgatgaggacagt
gttacatcctttgcagatgaaaattcatctggttccaagcaaagtgcaaattatattcaa
aaaggtgttatgtccgagcagcccgtcgaccatcaggaaatcaccatgctggataatgaa
aacatcagctctgaagcacaagtaatagttaaaaaaggaaaggatagtatggacataaac
gatgcttttcacagcaagagtggacatgaggagacagggaaagaggaaagagaagctgaa
agtgtccaaataaaagaaaccttaaagaaagagatcatctccattgctgattctggtgaa
ttaccttgtgaagtgcagagtcagtcactaaccaatggaaatattaatcaaaatgacagc
agcaacccagttgatgatctggaaggactttggatggacatgtctctagcaatggcatgt
tcgaagagcattggaagcaatcataatattgtcccatcagagaattcttgtgaacaagag
gaggatgattgtcatcatgatttcctgatgaaagatgatttggggattgtttgtcgcatt
tgtggtctaatccagcaatgtatcgaaaatatttttgaataccaatggaaaaagaggaag
caatcgtacagagcacacccctcagaacacagaaattctagtgacgcggatgcaattaac
aatactcctggagctattctcaaagtggttcctgatgcactatctatccaccctcaacat
tcccagcaaatgaaacctcaccaagtggaaggtttcaatttcttgatcaagaacttggca
gatgagaacaatcctggtggctgtattctagcacatgcaccaggttccgggaagactttt
ctgataattagttttgtccacagcttcctagccaaataccctgatggaaggccattgatt
attcttcccaagggaatactgtcaacatggagaaccgaatttctccgctggcaagttgat
gatgttcctttgtatgatttctactcctccaaagctgataaacggtctgaacagctcaaa
gttttgaaattgtgggaagacagcagaagcatcctgttgctgggctatcagcaatttgca
tgcatagtttctgaccacagttctgatacagaagccatcatgtgccaggagaagttactg
aaggtcccaagccttgtcattctagatgaaggacacaccccaagaaacgaggaaacagac
ctgctcacttcacttgaaaacatccaaactcctcgaaaagtggtcctctcaggaaccttg
tttcagaaccatgtgagggaggttttcaacattttgaaacttgtccggcccaaattcctg
aagatgaacagatcccgtgcaatagtgaagcgcatactaagcaaggtggacttgttgggg
aagagtgcacggtcaaagaatgtctcagataaggacttctttgatctggttcaagaacac
ctccaaaaagatggaaatgacaagatgagagtgatgatcatccaaaatcttcgtgagcta
actgcagacgtgcttcactactaccaaggccagcttctggaggagctgcctgggcttgtg
gacttcacagttttcctcaacatgagcagcaaacaggaagagatgatcaagggcttggat
gggataaacaaattcgcgaggcgctcgaaatgcagtgccatctctcttcacccatgcctg
aagaacgcccacagagccgacgaagatggtggaaatgtcacctacaagaacaacattggc
tccgtcatctgcgggatcgacatcgacgacggggcgaaggccaagttcatacacaacctg
ctgtctctctcggaggccacgggagagaaggtgctcgtgttcagccagtacgtgcgttcc
ctgctgttcctggagaagctggtcgcgagaacgaaaggatggaagccggaggtgcacacc
ttcagggtcaccggcggctcgacgcaggatcagcgggagcgggcggtccgcaggttcaac
ggctcgcgggacgccagggtgttcttcggctccatcaaggcgtgcggcgaggggatctcc
ctcgtcggcgcgtcccgcgtcgtcgtcctggacgtccacgagaacccctccgtgacgcgc
caggcgatcgggcgcgcgttccggccggggcagtccaggccggtgtactgctaccgcctc
gtcgccgccggctcgccggaggaggaggaccaccgcaccgccttcaagaaagagcgggtg
tcgaagctgtggttcgagtggaacgagctctgcggcagcggcgactttgagctcgcgacg
gtggatgtttcggacagcgaggataggttccttgaaagccctgcgctgaaacaagatatc
aaagccctgctcaaaaggtga
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