Oryza brachyantha (malo sina): 102718757
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Entry
102718757 CDS
T02995
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102718757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102718757
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
102718757
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102718757
Multi subunit type E3
ERAD complex
102718757
LMBR1L-GP78-UBAC2 complex
102718757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-RING_5
E3_UbLigase_EDD
zf-C2H2_DHX34
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
102718757
NCBI-ProteinID:
XP_006658559
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All DBs
Position
7:complement(10730266..10738875)
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AA seq
564 aa
AA seq
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MAAVNSLYVAAASTAASAAALQWWAGSLVDGATDAAGGDWLGIVLGSHVTVALLANLAAH
VFLVLILALKTLFFVQLTSSETRKVLEHIINYVLYKGTFLPLVVPPNSQQIILWSCWLGL
LCSLKMFQSLARERLEQLNASPSATPSKYFRVYSALLLVLSADLLWIKLCVGFCKSCNSK
LFWLLFFEPLSIGFETLQSIMVHGFQLFDIWQRHQMDSGADYLDFQKTYKQAAGSFSEWR
GRLIRNFGFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLLNLRTLVASFLKRIKTYT
KLRKALSSLDEALPDATSDEICAFDDECAICRGPMARAKKLSCNHLFHLACLRSWLDQGL
MDGYSCPTCRRPLFLSPQGHTRSTAAEVGNVQLIAEQLNMGLNQQRVPGQEHPTEHQNPA
DAVWRGAGLDSSWAPPWSSPGIDNPSSSSAVTSVGLSGVQMMMRQLTSVTENYGHTDATW
SLWPDPVAGSSIIPSSSSRSEGASVAGLRLRGTARTVNGSMSEVLSMVDRVREVLPHIPD
ELIIEDLMRTNNINATVNNLLLMQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgaacagcctctacgtcgccgcggcatccaccgcggccagcgccgcggcg
ctgcagtggtgggcggggtccctcgtcgacggggcgaccgacgccgcgggcggggactgg
ctcggcatcgtgctgggctcgcacgtgaccgtcgcgctcctcgcgaatctggcggcgcac
gtgttcctcgtcctcatcctcgcgctcaagacactattttttgttcaattgacctcttct
gagactagaaaggtgttggaacacattattaactatgtactttacaagggaactttcctc
ccattggtcgttcctcctaattctcaacaaataattctttggtcatgttggttgggtctt
ctttgttcattgaagatgtttcaatcattggctagagaacgccttgaacagctcaatgct
tcaccctctgcaactccatcaaaatattttcgtgtatattctgcgctgttgctggttcta
tctgctgatctactatggataaagctttgtgttgggttctgcaagtcatgtaattctaaa
ctattttggcttctgttttttgagccacttagtattggctttgagacactgcagtcaatc
atggtgcatggatttcagttgtttgacatatggcagcgacatcaaatggacagtggtgca
gattatcttgatttccaaaaaacttataagcaagcagcaggatctttttctgagtggaga
ggcagacttatcagaaattttggttttgtcattgacttgataagcttattgatgtcactt
ggtcattattcaatgatcttctggctccgtggtatggcgtttcatctggttgacgctgtt
ctcctattgaacctgcgtactcttgtagcttcatttttgaagcggataaaaacatacacc
aagttacggaaggcacttagttcacttgatgaagcactcccagatgccacatccgatgaa
atctgtgcattcgatgatgagtgtgccatctgtaggggaccaatggctcgagctaaaaag
ttgtcctgcaaccatctatttcatctagcttgcttacgatcatggttggaccaaggatta
atggatggttattcatgtccaacttgccgaagacctctctttctgtcaccccaaggtcat
acaagatctacagcagcagaggtaggaaacgttcagctaattgcagaacaacttaatatg
gggttgaatcagcagagggttcctggtcaggaacatcctactgaacatcagaatcctgcc
gatgcagtttggagaggagctggccttgattctagctgggcaccaccatggtcgagtcct
gggattgacaatcctagttcttccagcgccgtgacatcagtggggcttagtggagttcag
atgatgatgaggcagctgacttctgtgactgaaaattatgggcatacagatgccacctgg
agtctatggcctgatccagttgcaggatcctcaattattccatcctcttcctcgaggtct
gaaggtgcttcagttgctggcttgcggctgagaggcactgcaagaaccgtgaatggtagt
atgtcggaggttctctccatggtagatagagtacgagaagttttaccacatatccctgac
gagctaattattgaggatctgatgagaacgaataatataaatgctactgtaaataatctt
ctgctgatgcaataa
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