Oryza brachyantha (malo sina): 102719076
Help
Entry
102719076 CDS
T02995
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102719076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102719076
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102719076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP_TPR_like
TPR_19
Coatomer_E
RinB
Motif
Other DBs
NCBI-GeneID:
102719076
NCBI-ProteinID:
XP_006665031
UniProt:
J3KV33
LinkDB
All DBs
Position
9:1436315..1442470
Genome browser
AA seq
825 aa
AA seq
DB search
MEPKEAPPPPPQPQPSTEEEGMLSVTAAMARDAAVLFQSRRYADCAEVLAQLLLKKEGDP
KVLHNMAIAESFLDGCPDPKKVLEILGNVKRRSEELACASRQKADSANGTGNSASSGSRG
SGIIPLISAANSATTYGDEFDTTIITFNTAVILYHLHDYESALSILDPLYRNIEPIDETT
ALHVCFLLLDITLALQDASKAADIIQYLERSFGVVNVTNQNENATTAQQQSGQPKPSGKI
STPPDSDSNTCAGGSENLSAGNFSDDTLEFESFYSTLDGGNQNLGRPILNDFSRASADLA
ATAADLKVRLQIYKVRLLLLTRNLKVAKRELKVLMNMARGRDSSTELLLKSQLEYARGNY
RKAVKLLSTPNNRSEPAMLAMFYNNLGCILHQQRSNHTSVWCFSKALKYSLSLRSEKPCK
LTAISQDKSCLISYNCGVQHLMCGKPFLAARCFREAMPLLCNRSLFWLRFAECSLLALEK
GILTANGATSCNDEIEVDVVGSGKWRHLVINPVKPSHFSDSGEEVTLDKNGNLISLRFAR
QCLLNAQVLLDPSEKENLVIASGTEESNQTSLQGPKGSGQKNIHTDSKPPGPVLTNANGE
QKGMTNLNVTLQSSLALYDDICRKENLKIRQAILGDLAFIELCLQNYLKALSIAKSLQQL
PECSRIYVFLSHVYAAEALCALNRPKEAAEQLTVYLRDGDDIELPYSVENCEKALVEKDS
DGEDSVAPVVTKLSSGESQYPESLKPEEAQGVLYIDLGMTAAVQGEFEQANYMVSRGVAL
LPNNPRAVLASVYVDLLQGKSQEAIAKLRRCRNVRFRRHSVAVSS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaggaggcgcccccgccgccgccccagccccagccctccacggaggaggaa
gggatgctctccgtcacggccgccatggcgagagacgccgccgtgctgttccagagccgc
cgctacgccgactgcgccgaggtgctcgcgcagctcctgctcaagaaggagggcgacccc
aaggtccttcacaatatggccattgcagaatctttcttggatggttgtccggacccaaag
aaggtgcttgaaatcctaggcaatgttaagagaagaagtgaagagcttgcttgtgcatct
agacaaaaagctgattctgccaatgggaccggaaacagtgcttcttctggatcaagaggc
agtggcattatacctctgatttctgctgcaaatagtgcgacaacctatggggatgagttt
gacacaaccataataacatttaacactgctgttattctttaccaccttcatgattatgaa
tctgcgctttctattttggatccattgtaccgtaatattgaaccaattgatgagacaact
gctcttcatgtatgctttctgttattggatattaccttagctttgcaagatgcatcaaaa
gctgcggatataattcagtacctggagagatcatttggagtagtcaacgtgacaaaccag
aatgaaaatgctactacagctcagcagcagtcaggtcaaccaaagccttctggaaagatt
agcacacctccagattctgattcaaatacttgtgctggtggatctgagaacctttcggca
ggaaatttttctgatgatacacttgagtttgaatctttttactctaccttggatggtggt
aatcagaacttgggcagaccaattttaaatgatttctcaagggcttcagctgatcttgct
gccactgctgctgatttgaaagttagactgcaaatatacaaggtccggcttctgcttctc
acaaggaaccttaaggttgcgaagcgagaactgaaagttctgatgaacatggcacgtggt
agggattcatcaacggagcttctcctgaaatctcagttggaatatgccagaggaaactat
cgcaaggctgtgaagctgctgagcacacccaataatcggagtgaaccagcaatgctggcc
atgttctacaacaatcttggttgcatactccaccaacagagatcgaaccatacctcagta
tggtgcttcagcaaagcattgaaatacagcttatctcttcgttcagagaaaccatgcaag
ctgaccgcaatatcacaagacaaatcttgtcttatttcatacaactgcggcgtccaacat
ttgatgtgtgggaaacctttcttagcagctcgctgttttcgtgaagccatgccgctcttg
tgcaacaggtcccttttttggctccgttttgctgagtgtagcctgctagctctggaaaag
ggtatcctcactgcaaatggcgccacttcatgcaatgatgagattgaagttgatgttgtg
gggtcagggaaatggcggcacttagttatcaacccagtaaagccaagtcatttttcagat
tctggggaagaggtaactttggacaaaaatggaaatttgatatcccttagatttgctaga
cagtgtctactcaatgcccaagttttattggatccctccgagaaagaaaatctggtcatt
gcatcaggcacagaggaatccaaccaaacatcactgcaaggcccgaaaggctcaggtcag
aagaatattcatacagattccaaaccacctggtccagtattaactaatgcaaatggagaa
cagaagggaatgacaaacttgaatgtcaccttgcagagctctcttgctttgtatgatgac
atatgtagaaaagagaacctcaaaatcagacaagccatcctgggggaccttgcatttatt
gaactgtgtcttcagaattacttgaaagctttatctattgctaagtcactacagcagctg
cctgaatgttccaggatatatgttttcctcagccatgtatatgcagctgaagctctatgt
gcactgaatagaccaaaggaggctgccgagcaattaactgtatatttgagagacggtgat
gatattgagttgccttacagtgttgagaattgtgagaaggcccttgttgagaaagacagc
gatggtgaagattcggttgctccagtagtcacaaagttgtcctcaggagaatctcaatat
ccagaaagcctcaagcctgaggaagcacagggtgttctttatattgacttgggcatgaca
gctgccgtgcagggagagtttgagcaggctaactatatggtaagccgtggtgttgccttg
ttgcccaacaaccctagggcagtgctagcatcagtttatgtggaccttctgcaagggaag
tcgcaagaggctatcgccaagttgagacggtgtagaaatgtgagatttaggaggcatagt
gtagcagtcagcagctaa
DBGET
integrated database retrieval system
