Oryza brachyantha (malo sina): 102719109
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Entry
102719109 CDS
T02995
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102719109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102719109
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102719109
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_6
F-box_5
LRR_4
F-box-like
F-box
LRRCT_2
Motif
Other DBs
NCBI-GeneID:
102719109
NCBI-ProteinID:
XP_006654054
UniProt:
J3M413
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Position
5:complement(2245659..2252095)
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AA seq
587 aa
AA seq
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MGRGGSRAAAAAAAPPWHSLPDEVWEHAFSFLPTAADRGAAAGCCSSWLRAERRSRRRLA
VANCYAAAPRDAVERFPAVRAAEVKGKPHFADFGLVPPAWGAAAAPWIAAAADGWPLLEE
LSFKRMVVTDECLEMIAASFRNFQVLRLVSCDGFSTAGLAAIAAGCRHLRELDLQENEIE
DCSIHWLSLFPESFTSLVTLNFSCLEGDVNIAVLERLVTRCRNLKTLKLNNAIPLDKLAS
LLRKAPQLVELGTGKFSADYHPDLFAKLEAAFGCCKSLRRLSGAWDAVPDYLPAFYCVCE
GLTSLNLSYATVRGPELIKFISRCKNLQLLWVMDLIEDHGLAIVASSCNKLQELRVFPSD
PFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPHTP
DYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSIGAHADRLEMLSIAFAGNSDLG
LHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSLWMSSCLLTLGACRQLARKMPR
LSVEIMNDPGRVCPLDSLPDESPVEKLYVYRTIAGPRSDTPACVQIV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcggctcgcgcgccgccgccgccgccgcggcgccgccgtggcactcgctc
ccggacgaggtctgggagcacgccttctccttcctccccaccgccgccgacaggggcgcc
gcggccgggtgctgcagctcctggctccgcgctgagcgccggtcgcgccgccgcctcgcc
gtcgccaactgctacgccgccgcgccgcgggacgccgtcgagcggttcccggccgtccgt
gccgcggaggtcaagggcaagccccacttcgccgacttcgggctcgtgcccccggcctgg
ggcgccgccgcggcgccgtggatcgccgccgccgccgacgggtggccgctgctcgaggag
ctcagcttcaagcgcatggtcgtcaccgacgagtgcctcgagatgatcgccgcctccttt
aggaacttccaggtgctgcgcctcgtctcctgcgacggcttcagcaccgccggcctcgct
gccattgccgccggttgcagacacctaagagaacttgacctgcaagagaacgagattgag
gactgttctattcattggctcagcctcttcccggaatccttcacttctctagtaactcta
aatttttcatgcttagagggggatgtcaatatcgctgtacttgagcgattagtaactaga
tgtcgcaacctgaagactctcaagctcaacaatgctatacctcttgacaagcttgctagc
cttctccgtaaggctccccagctagttgaacttggaactggcaaattctctgctgactac
catccagacctgtttgcaaagctggaagcggcatttggatgctgtaaaagcttgagaagg
ctttctggggcttgggatgctgttccagattatctaccagcattctattgtgtatgtgag
ggcctcacatcacttaatctgagttatgctactgtacgaggtcctgagctcatcaaattc
attagcagatgcaaaaacttgcaactattatgggtgatggacctcattgaggatcatggt
ttagctatcgtggcatcatcttgcaataaacttcaagagctgcgggtcttcccttctgac
ccttttggtgcaggattcttgactgaaagaggccttgttgatgtttctgcaagttgtcca
atgttggagtcagtgctctacttctgcaggcggatgacaaatgaggcacttattaccatc
gcaaagaaccgtcccaacttcacttgcttccgcctatgcatccttgagccccacactcca
gactacatcacacgggagcctcttgatgcaggtttcagtgccattgtggaatcgtgcagg
ggcctcaggcgtctctctatctcaggccttctcacagatcttgtgtttaaatccattggg
gcacatgccgatcgtcttgagatgctttcaatcgccttcgctgggaacagcgacttgggc
ctgcactacatcctctcaggctgcaagagcctgaagaaactggagatcagggactgcccg
tttggtgataagcccttgctggcaaatgcagcgaagctggagacaatgcgatccctttgg
atgtcgtcgtgcttgttgaccctgggcgcatgccgacagcttgcacgcaagatgccccgc
cttagcgtcgagatcatgaatgatcctggacgagtgtgccccttggactcgcttccagat
gaaagccctgtcgagaaattgtacgtctaccggacgatcgcaggtccaaggtctgataca
ccagcatgcgtccagattgtgtag
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