Oryza brachyantha (malo sina): 102719213
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Entry
102719213 CDS
T02995
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
obr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102719213
04120 Ubiquitin mediated proteolysis
102719213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102719213
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102719213
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102719213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_11
zf-RING_5
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
102719213
NCBI-ProteinID:
XP_006656910
UniProt:
J3MDH0
LinkDB
All DBs
Position
6:complement(7535863..7540904)
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AA seq
501 aa
AA seq
DB search
MIRLQTYAAFSLMATATAVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL
VKRVFLGPLREAEVERLNEQAWREVVEILFAVTIFRQDFSVTFLAMVAALLLVKALHWLA
HKRVEYIETTPSVPMLSHARIVSFMVFLLVVDCLFLSNSLRSLINKREASVAIFFSFEYM
ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPILPPDNGRPAVRPHGIHPGVQPAPGNGI
PGSEGAAGENVIRRQAKLEAAASAASLYGRSFAYTPANNLNRHSNSSQSTSSGGPQSGEA
STSNQSPKDHATAGPSAPAFYARGAVGSMTTARELENSLQKAYENAIKSQIEMLQIQLQM
LQHGATSSATNNENGDHTKSD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattcggctgcagacgtacgcggcgttcagcctgatggcgacggcgacggcggtgtac
tacgcgttcagcagccgggagcagttctacccggcgatggtgtacctctccacctccaag
atctgcttcgtgctgctgctcaacacgggcctcgtcgccatgtgcgtcgcctggcagctc
gtcaagcgggtcttcctggggccgctgcgggaggccgaggtggagcggctcaacgagcag
gcgtggcgggaggtcgtggagatcctcttcgcggtcaccatcttcaggcaggacttctcg
gtcaccttcctcgccatggtcgccgcgctgctgctcgtcaaggcgctgcactggctcgcg
cacaagagggtcgagtacatcgagaccacgccgtccgtgccgatgctctcgcacgccagg
atcgtctccttcatggtgttcctactcgtcgtcgactgcctcttcctgtccaactcgctc
aggtcgctgataaacaagcgagaggcgtctgttgccatcttcttttcgtttgagtatatg
atactagcaacatcgacagtatctacatttgtgaagtatatattctatgtcagtgacatg
ctaatggaaggtcaatgggagaaaaaggcagtgtatacattttacttggagctgatcagt
gaccttgtacacttgtctttgtatatgctcttcttcatagctatcttcctgaactatggt
gtcccactgcacttgatacgtgagctgtatgagacattccgcaacttcagaatccgtatt
gcagattatgtgcgctacagaaagataacttccaacatgaatgaaagatttccagatgcc
acagcagatgagctcaatgcgagcgatgctacatgtatcatttgccgtgaggagatgacc
acagcaaagaagctgctttgtggacacctgttccatgtgcattgtttgaggtcgtggtta
gaacgccaacacacttgccctacatgtagagctccaattctgcccccggataatgggcgt
cctgcagtacgtccgcatggaattcatcctggagttcagcctgctccaggcaatggtata
ccaggttcagaaggagcagcaggtgagaacgtaatcaggcgccaagcaaaacttgaagca
gctgcttcagctgcttccttatatgggagatcctttgcttatactccagcaaacaatttg
aataggcattcaaattcttcacagtctacatcaagtggtggtccacaatctggagaagca
agtacttccaatcaatcaccgaaagaccatgcaaccgctggtccttcagcacctgctttt
tatgcacgtggtgctgttggttcaatgacaactgctagggaacttgaaaattcactgcag
aaggcatacgagaatgctataaagagccagatagagatgttgcaaatccaactgcaaatg
ttgcagcatggggctacttcatcagcaactaacaatgagaatggtgaccacacaaaaagc
gattga
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