KEGG   Oryza brachyantha (malo sina): 102719223
Entry
102719223         CDS       T02995                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03083  Polycomb repressive complex
obr04120  Ubiquitin mediated proteolysis
obr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102719223
   04120 Ubiquitin mediated proteolysis
    102719223
  09126 Chromosome
   03083 Polycomb repressive complex
    102719223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obr04131]
    102719223
   04121 Ubiquitin system [BR:obr04121]
    102719223
   03036 Chromosome and associated proteins [BR:obr03036]
    102719223
Membrane trafficking [BR:obr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    102719223
Ubiquitin system [BR:obr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     102719223
   Cul7 complex
     102719223
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     102719223
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     102719223
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF927 FrhB_FdhB_N
Other DBs
NCBI-GeneID: 102719223
NCBI-ProteinID: XP_006658847
UniProt: J3MN58
LinkDB
Position
7:16649705..16650617
AA seq 152 aa
MITLKCSDGELIEVRAASAMLSKILGEMVESGHADGVIPLTEIDSKTFKKVIKYCDKHAD
FAANNKSGTDEEKDWDKGFIDELDKNRNFLFCVIMAANFLCIRGLLEDGCQKVADTIKGK
TPEEIREAFNIENDLTAEDLKEISLENEKVFG
NT seq 459 nt   +upstreamnt  +downstreamnt
atgatcaccctcaagtgcagtgatggcgagctgatcgaggtgagggcggcgtcggcgatg
ctgtccaaaatcctcggggaaatggtcgagtccggccacgccgatggagtcatcccgctc
acggagatcgactccaagaccttcaagaaggtgatcaagtactgcgacaagcacgccgac
ttcgccgccaacaacaagtccggtaccgacgaggagaaagactgggacaagggcttcatc
gacgagctggacaagaacaggaacttcctcttctgcgtcatcatggccgccaacttcctc
tgcatccgtggactcctcgaagacggctgccagaaggtcgccgacacgatcaagggcaag
acccccgaggagatccgcgaggctttcaacatcgagaacgacctcaccgctgaggacttg
aaggagataagcctggagaacgaaaaggtcttcgggtag

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