Oryza brachyantha (malo sina): 102719308
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Entry
102719308 CDS
T02995
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obr01002
]
102719308
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102719308
Enzymes [BR:
obr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102719308
Peptidases and inhibitors [BR:
obr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102719308
Ubiquitin system [BR:
obr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102719308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
102719308
NCBI-ProteinID:
XP_006657202
UniProt:
J3MGF1
LinkDB
All DBs
Position
6:complement(18627728..18634158)
Genome browser
AA seq
1000 aa
AA seq
DB search
MLGGGGGGGGGGGAGLGLDLSAVIRAAVVGLVLFSAAVVAVRRAASRYFVMFAASCDDHH
QHHHHSDSPGSYRMPPRGEQQQLQGAGAQAASRGGEPCAACGCIATKKCSGCKRVRYCSQ
GCQSKHWQSGHKFKCKQMKKSSPADKLSSGDEEDRNKSSVFGPISLVPIRRKLNKVIFPY
DEFLKLCNWRDLDYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHED
WCFLCELQCHIQKASESIHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSAC
LDEFGGEKAVDPSTQETTLIQHIFGGRLQSQVQCTSCGMVSNRYENMMDLTVEIHGDADS
LEECLDQFTAVEWLDGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLN
KRVTFPMKLDLTPYMSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDD
CKVMAVDEEEVHAQGAYMLLYSRRTARPRPLIAVEELMKHQQQLKVSHPNGQNHLIQEVV
PLEGVSSLKPSEDQQVDFESNNISLHPPISTVPLALDENTRADSGFPLEDSTTMRSVQFG
NSTCETSLVHSSAEQCEARASCVDSVDYMEIDTEAGVEVERWSRPVSSDFTGVMDNTTLV
PALENGFAGKPIPSRINPSFAEGYQIGDNGAGSSQELNGHCDRDFSCPEQGGMTNSGNTS
SPSTQCYGNKFATSTNGNYSIRNGDTLSSSNSLHVGKQNVGFNGFNPKPYTEPSGSNADL
NKCTPNLPAKDSQGDMPFLHHGFLLRHCSSEKAGKRDDGLPFNNATSSSFMSSKSSNISS
SQNGGGKAFSSPSFHAKHCREAAATDTSASPVHDVKTNYNISLEQKSNGAAVSSDLIKES
WSPDCTTFGTFYQQRATSGDNASSRPDENGHATFVAKNFSHEGENGSNGIVDLRGGINQR
DGIGSKITDQVDFISDALEHDSLRRRITSNFPDQNGIDAQ
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgctggggggaggcggcggcgggggcggtggtggtggcgcgggcctgggcctcgacctc
tcggcggtgatccgggcggcggtggtcggcctcgtgctcttctcggcggccgtcgtcgcc
gtgcgccgcgccgcgtcgaggtacttcgtcatgttcgccgcctcctgcgacgatcaccac
caacaccaccaccacagtgacagtccgggctcctaccggatgccgcctcgcggggagcaa
cagcagctgcagggcgcgggggcgcaagccgccagtcggggcggggagccctgcgccgcg
tgcggctgcatcgccaccaaaaagtgctccgggtgcaagcgcgtgcggtactgttctcaa
ggatgtcagtcaaagcattggcaatctggtcacaaattcaagtgcaaacaaatgaaaaaa
tcaagtcctgctgacaagctatcaagtggagacgaggaagacagaaataaatcatctgtt
ttcggtcccatctcattagtgcccatccgtagaaaattaaacaaggtcatctttccttac
gatgaatttttaaaactttgcaactggagggaccttgattatttaccttgtggccttttg
aattgtggaaacagttgctttgccaatgttgttttacaatgtctttcatgtacgagacca
cttgcagcctatcttttaggaatggaccatagcagggaatgttataagagacatgaagat
tggtgtttcttgtgcgaactgcaatgtcatatccaaaaagcaagtgaaagtatacatcca
tttgcccctaagaacattctttctcacctgccaaatataggtgggaaccttggctttggt
agacaagaggatgctcatgaattcatgaggtttgcaatagataagatgcaatctgcttgt
cttgatgaatttggaggtgagaaagctgtagaccctagcacgcaagagacgactcttatt
cagcacatatttggtggtcgtctgcaatcccaggttcaatgtacctcatgtggaatggtc
tcgaatcgctatgagaatatgatggacttgacagttgaaattcatggtgacgctgactcc
ttggaagaatgcttagatcagtttactgcagtagagtggcttgatggtgataacaagtac
aaatgtgatggatgcagcgactatgtcaaagcacagaaacggcttacagtttatcaagct
ccaaatatactcacaattactcttaaacgattccagagtggtagatttgggaaactgaac
aagagagttacattcccaatgaagttagatctaacgccatacatgagtagcaccgatgga
agtgaccaatatgatctctatgctgttgttgttcatctggatatgctcaatgcctcattt
tttgggcattatatatgctacataaaaaattaccgaggacgctggtacaaaattgatgat
tgcaaggttatggctgttgatgaggaggaagtacatgctcaaggtgcttatatgcttcta
tatagcaggagaacagctcgtcctaggccactaattgcagtagaagaacttatgaaacat
cagcaacagttgaaagtgtcccatccgaatggacaaaatcatttgatacaagaggttgtg
ccattagaaggtgtgtcatctttgaaaccttcagaagatcagcaagttgattttgaatcc
aacaacatatctttgcacccaccaatttcaacagtgccgcttgcccttgatgaaaataca
agagcagattcaggttttccattggaggattctacaaccatgagatctgtgcagtttggc
aactccacatgtgaaacctctttagtccattcctctgcagagcagtgtgaagcacgtgcc
tcatgtgttgattctgttgactacatggaaattgatactgaagcaggcgttgaagttgaa
agatggagcaggcctgtctcaagtgatttcactggagtgatggacaatactacattggtc
ccagcattggagaatggttttgcagggaaaccaataccctcaagaataaatccatctttt
gcagaaggatatcaaattggtgacaacggtgctggttcctcccaagagttgaatggtcat
tgcgatagagatttcagctgcccagagcaaggcggtatgaccaacagtggcaacacatcc
tctccaagcacacaatgctatggaaataagtttgcaacatccaccaatggcaattattct
attagaaatggtgatacattatctagcagcaactccttacatgtgggcaagcagaatgtt
ggctttaatggttttaatccaaaaccttacactgaaccatcaggcagcaacgcagatctg
aataaatgtaccccaaacctgccagcaaaagattcccaaggggacatgccattcttacat
catggcttccttctaaggcattgttctagcgaaaaagcaggcaaacgtgatgatggcttg
ccattcaataatgccacatcatcatccttcatgagtagcaaatcaagtaatatttcatct
tctcaaaacgggggaggcaaagcattctcctctcctagttttcatgcaaaacattgcagg
gaggcagctgccacggacacctctgcaagccctgtgcatgacgtgaaaacgaactataac
atttccttggagcaaaaatctaatggtgctgcagtatcatcagacctgataaaagaaagt
tggagtccagattgcacgacttttggcactttttaccaacaaagagcaacttccggtgat
aatgccagcagccgccctgatgaaaatgggcatgcgacttttgttgccaagaatttcagt
catgaaggagaaaatggaagtaatggaattgttgatttgagaggcggcattaaccaaagg
gatggcataggatctaaaataactgaccaagtcgatttcatctctgatgcacttgaacat
gatagtcttcggcgaagaataacttcaaattttcctgatcagaatggtattgatgctcaa
taa
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