Oryza brachyantha (malo sina): 102719457
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Entry
102719457 CDS
T02995
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102719457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102719457
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
102719457
SWR1 complex
102719457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
Motif
Other DBs
NCBI-GeneID:
102719457
NCBI-ProteinID:
XP_006647708
LinkDB
All DBs
Position
2:complement(21258251..21270627)
Genome browser
AA seq
2037 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHLLGEMTWLAKEFDSERKWKLSMA
KKIAQRANKGVVDQATKDERKQKEEEVRLRKVALNISKDVKKFWTKIEKLVFYKNQLELE
ERKKKALDKQLDFLLGQTERYSTMLAENLVDVSFLQNQENESLQTNQRSQQELAQENINA
SIPNDVDNDEMDDDYNSSLGEEPEDDEHTIDEDEAQITEAERNEELAALHAEADLPLDDI
LKLYTKAKVSRESSPDGKDVFSDSDSKNLIKDSLNQANGCNDESDHTSSDEGISSEEADD
YHSYSEFVKKNTGKCNGNISSVDAKDDKDYVANDDGKDDEATLSEEEELAKQEDPDPLEE
IKLLQKESEIPLEELLARYQKDGYADDDTTELENSPALSVEDVKTNMSVDDESVEADIVK
VTNNQSAETMEVNRDQSAEIVEVNNDTFEDNDTTDMLGAENVSGSVLQIETLEPIVQESA
VKEGEVTDIKAMPNGDNSDNVIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKHSLREYQ
HIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNW
ETEFLKWCPAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKY
LILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQE
FKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPQKHEHVIYCRLS
RRQRNLYEDFIASSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGIN
KQISSFVSMVLDKGPFSQVDLSDMNFIFTQNEFNMTSWELDEVAAIFPPSITRRGSGSGI
SRSSNDGQRRNGRNIFEEIQNSLWEERIKEAKERAASIAWWNRVRCQKGPVYGTNIREVL
TIKHPVSDVLEKKNNPLCHMEFSSSLADLVLSSVERFKKMLDFIESFTFAIPAARAPTPF
FWCSKGKSPVIEPAYREKCMNEFSPVFSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAIL
LRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKF
FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISEST
IEENILKKANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHSSLHAENQQKDCSMSAGP
SNGTSLALSNLDVEAAIRQAEDEADYMALKKLEQEEAVDNQEFSEEVAGRLEEEDLVNEE
DAKHDEHTNEEHKNQCSELEKDKHVALSMNQLDEEKAITLAGGDGDIDMLADVKQMAAAA
AAAGQASSSFENQLRPIDRYAMRFLELWDPIIDKAAINYQVNVEEEEWELERIEKLKEDL
EAEIDEDQEPLSYESWDVDFATTAYRQHVEALAQKQLLEEQEKQAREAAKELEEKNDNMS
AQRKKSKKNKKKAAKFKSLKKGRLSSESEVMVEETSVDTMSIDDNAPSPELMSDESVHHY
SNKRRRAMSTNEDENNNSRSLKKLKKAPKSSFISEALSPKHLEGKQLKFKDELNDFDPKS
AARIKSDGRISIPFMPVKRVMVIKPERLKKKSLWSRDCASDSWTTEEDAVLCATVNEYGP
LWELASDSLHAVPGGAFYRGRYRHPVHCCERFRELVCKHILSATDNSNSEKVPSGTGKAI
LKVSEDQTQMLLNVISELPNNELLLQKHFMAVLSSVWRSKSARESRSVTSNSYTLHKPGR
FSENWSIANFRPNFNLVRTALADAQAQCPRMVVPTNNHESRRNYLELELDFLTDQCDYEA
DFPSVVNVSVLEPEPLKHAMEPVEQSLLSTLSYRHAENRFRIVSETCFEGEGSHWASSSF
HTCDAGRHKSGSKSIGKQKASSESGRPAKSKIQRTTEPQEGPVTNSFHRIPGQLLHNSSE
FHITQSLSDFGINDSEFTHFEDLPQEADTDFVPYQYDSDVLSCIEELDPLSDFTDIG
NT seq
6114 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaggtcctcggtcaaagctagatcatgagacaagagccagacgtcagaag
gctcttgaagcccccagggagcctcgaaggccaaaaactcactgggatcatcttcttgga
gaaatgacttggctggcaaaggagtttgattctgagagaaaatggaagctatccatggct
aaaaagattgctcaaagagctaataagggtgtagttgaccaagcaacaaaggatgagaga
aaacagaaggaggaagaagttcgcctgagaaaagttgccctaaatatttctaaggatgtg
aagaaattctggaccaaaatagagaagctggttttttataagaaccaactggagcttgag
gaaaggaaaaaaaaggccctagataagcaactggatttccttttaggacagactgaaaga
tattcaacaatgctggcagaaaaccttgtggatgtgtccttccttcaaaatcaagaaaat
gaatctttacagactaatcaaagatcccagcaagaactagcacaagagaacataaatgca
tcaattcctaatgatgttgataatgatgaaatggatgatgactacaacagctccttgggg
gaagagccagaagatgatgaacacactattgacgaggatgaagctcaaattacggaggct
gagcgcaacgaggaactggctgctttgcatgcagaagctgatctaccactggatgatatt
ctcaagttgtacacgaaagccaaagttagcagggaaagcagtccagatggcaaagatgtt
tttagtgactcagattcgaagaatttgattaaagattctttgaaccaggctaatggctgc
aatgatgaatctgatcatacttcaagtgatgaaggcatttcttctgaggaagcggatgat
tatcactcctactctgagtttgtgaaaaagaacaccgggaagtgcaatggcaatatctca
tctgtcgatgcaaaggatgacaaagattacgttgccaatgatgatggaaaggatgatgaa
gctactttgtctgaagaggaagagttggcaaagcaagaagatcctgatcctctggaagag
attaagttactgcagaaagagagtgagatcccacttgaagaacttcttgcgaggtaccaa
aaggatggctatgcagatgatgacacaacagaattggaaaattcacctgcactatcagtt
gaggatgttaaaaccaacatgtctgtagatgatgagtctgtggaggcagatatcgtgaaa
gtgaccaacaatcagtctgcagagaccatggaagtgaatagggatcaatctgctgagatt
gtggaggtgaacaatgacacatttgaagataatgatacaacagacatgctgggagctgag
aatgtgagtggtagtgttctacaaatagaaacgttggagcctattgtacaggaaagtgct
gttaaagagggtgaggtaactgatattaaagcgatgcccaatggagataatagcgacaat
gtaattgctgatgctgcagctgctgcaagatcagcacaaccaactggtaacactttctca
acaacaaatgtgcgaacaaaattcccttttcttctgaagcattctcttcgagaataccag
cacattggactggattggctggttgctatgtatgaaaagaggctgaatggaattctagca
gatgaaatgggtttggggaagacgatcatgaccatctccttgcttgcacacctcgcatgt
gagaagggaatatggggcccacatcttattgtagtgccaaccagtgttatgctaaattgg
gagactgaatttctcaaatggtgtcctgcgtttaaaatactgacttattttggaagtgca
aaggagagaaaacagaaacgtcagggttggatgaaaccaaattacttccatgtatgcatc
acaacatacaggcttgttattcaagactccaaggtgtttaagcgaaaaaagtggaagtat
ctcattcttgatgaggctcatctgataaagaactggaaatcacaaagatggcaaactttg
ctaaattttaattcaaagcggcgcattcttttaactggaactcctctgcaaaatgacctt
atggaactttggtctctcatgcactttttaatgccccatgtatttcagtcgcatcaagag
ttcaaggactggttctgcaatccaatttcaggcatggtagagggccaagacaaggtaaac
aaagaagttatagatcggttgcacaacgtccttcgcccatttatacttcgtcgactgaaa
cgggatgtggagaaacagttgccacagaagcatgagcatgtcatatattgccgactttct
agaaggcaaaggaacttgtatgaagatttcattgcaagctcagagactcaggcaacattg
gctagtggaaactattttggtatgattagcatcattatgcaacttagaaaggtttgtaac
catccagatctttttgaaggtcgaccgattatcagctcttttgacatggcagggatcaac
aagcagatcagctcttttgttagcatggtccttgataaaggcccattttctcaggttgac
ctgtcagatatgaattttatatttactcaaaatgaatttaatatgacctcttgggagtta
gatgaggtcgctgccatttttcctccaagcataacccgcaggggctctggttcagggata
tctcgttctagtaatgatggtcagagaaggaatgggagaaatatttttgaagaaattcag
aattccctttgggaggagagaataaaagaagccaaggaaagagcagcttccattgcatgg
tggaatagggtaagatgccagaaggggcctgtttatggcacaaatattagggaggttttg
accataaagcatcctgtgtctgatgtacttgagaagaagaacaatcctttgtgccacatg
gaattttcatcaagcctggcggatcttgttctttcatcggtggaacgcttcaagaaaatg
cttgattttattgagtcatttacttttgcaattcctgctgcacgggcacctacaccattt
ttctggtgcagcaaagggaagtctcctgttattgaaccagcatacagagaaaaatgtatg
aatgagttttctcctgttttctcccctataaggcctgcgattgttcgccgtcaagtgtac
tttcctgacaggcgtttgatccagtttgactgtggtaaactgcaagaacttgctattttg
ttgaggcgtttgaagtcagaaggacacagggccttgatatttactcagatgactaagatg
cttgatatactggaggaattcattaatctgtatgggtatacatatttgcgactagatgga
tcaacccagccagaagagaggcagacactgatgcagaggtttaatactaacccaaagttt
tttctttttattttatccactcgtagtggtggtgtgggtatcaacctagtaggtgcagac
actgtcattttctatgatagtgactggaatcctgcaatggaccaacaagcccaggacaga
tgccacaggataggtcaaactcgtgaagttcacatctatagactgattagtgagagcacc
atagaggagaatatactcaagaaagccaatcagaagcgagctcttgatgatctagtgata
caacgtggtagctacaatacagagttcttcaagaagcttgatcctatggaattcttttct
gggcactcctcacttcacgcagagaatcaacagaaagattgctctatgtctgctggaccc
tcaaatggaactagtttggcactgtcaaatttggatgttgaggcagctattagacaggca
gaagatgaagctgactatatggctctcaagaagctggagcaggaagaggctgtggacaat
caagaattcagcgaggaggttgctggaagacttgaggaggaggatcttgtaaatgaggag
gatgctaagcatgatgaacacaccaatgaagagcataaaaaccaatgttctgaattggag
aaggacaagcatgttgctttatcgatgaatcaattagatgaagaaaaggctataactttg
gctggtggggatggagatattgacatgcttgctgatgttaagcagatggctgctgcagct
gctgcagctggtcaagcaagttcgtcttttgaaaatcagctccgaccaattgatagatat
gccatgcggtttttggaactctgggatccaataattgataaagctgctataaactatcaa
gtcaatgttgaagaggaagaatgggaacttgaacgcattgaaaaactcaaagaagattta
gaagcagaaattgatgaagaccaggaaccgctttcttacgagtcatgggatgttgatttt
gctactacagcatatcggcaacatgttgaggctctagctcaaaaacagttgttggaggag
caagaaaaacaagcccgcgaagcagcaaaagagttggaggaaaagaatgataatatgagc
gctcaacgcaaaaagtcaaaaaagaacaagaagaaggcagcaaagttcaaatctctgaag
aaaggacgtttgtcgtccgagtcagaggttatggttgaggaaacatctgtagatactatg
agcattgatgacaatgcaccctcaccagagctaatgagtgatgaatcagtacatcattat
tctaacaagcgtaggagggcaatgtcaacaaatgaggatgagaacaacaatagcagaagc
ctgaagaagctcaagaaagcccctaaatcaagtttcatttcagaggccttatcacccaaa
catcttgaaggcaaacagcttaagtttaaagatgaacttaatgattttgatccaaaatcg
gcggcaagaatcaagagtgatggccgaatttccattccattcatgccagtaaaacgtgtc
atggtaatcaagccagagagattgaagaagaagagcctatggtcccgagactgtgcttca
gactcatggacaactgaggaagatgccgttctttgtgcaactgtaaatgagtatggtcct
ctttgggaactggctagtgattctcttcatgctgtaccaggtggtgcattttatagggga
aggtaccgtcatccggtgcattgctgtgaaagattccgggaattagtctgcaagcacatc
ttatcagcaacagataattcaaacagtgagaaggtcccttctgggaccgggaaggctatc
ttgaaagtatctgaggatcaaactcagatgttgctcaatgtaatcagcgaacttcctaac
aatgagttgcttctccagaaacatttcatggctgtcctttcatctgtttggagatcaaag
tctgcccgtgagtcccggagtgttacgagtaactcttatacactccataagcctggtaga
ttcagtgagaactggtccattgcaaacttcagaccaaactttaatctagtaaggacagcc
ctcgcagatgctcaggctcaatgtccaagaatggtagttccaacaaacaatcatgagtcc
cgccgtaactatttggaactggaactggatttcttgacagatcagtgtgattatgaggct
gactttccatctgtagttaacgtgtccgtactagaaccggaacctctaaaacatgccatg
gaaccagtggagcaatcactgctgtccacactttcttatagacatgctgagaaccgattc
aggatagtatcagaaacttgttttgaaggggaaggctctcactgggcctcatcttctttc
cacacatgtgatgctggtcggcataaatctggttcaaagtccataggaaagcagaaagca
tcgtcagaatctggaaggcctgccaaatccaaaattcaaaggactactgaaccacaggaa
ggcccagttacaaatagttttcataggattccgggtcaacttctgcataactcatctgaa
ttccacattacccagtccctatctgactttggcatcaatgattctgaattcacccacttt
gaggatcttcctcaagaggctgacacagactttgttccgtaccaatatgactctgatgtc
ctttcttgtattgaggagttggatcctctttcagacttcactgacatcggatga
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integrated database retrieval system
