Oryza brachyantha (malo sina): 102719666
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Entry
102719666 CDS
T02995
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102719666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102719666
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102719666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
ORF11CD3
Motif
Other DBs
NCBI-GeneID:
102719666
NCBI-ProteinID:
XP_006653029
LinkDB
All DBs
Position
4:complement(21062528..21067835)
Genome browser
AA seq
674 aa
AA seq
DB search
MEPSRNPGPWQCTICEHGNDARHSSCEQCGVLRDFSLYFNNALEVDGRVKRRGMHSTVSV
LARTLFSPSSAKSKDVVFSGGFKVSRTATGNTQATLDALHRTYMTRKERRINIVPFKFDT
PSPDDMVATGLKSSRSIRKVDTDAPCIDVHIAEKKVMDNDSFIITEKDTTADLNSLVKSN
GFGESKNVSVDSENKTLILDHELQQLSLERKLQKSKPKIKKPVSLSLYKPEPWMLQHEDE
DIPTQLNISIVGHVDSGKSTLCGRLLHSLGKISKKQMHKYEKEAKEKGKGSFAYAWAMDE
SADERERGITMTVGVAYFDTKNYHVVLLDAPGHKDFVPNMISGATQSDAAVLVIDASIGS
FEAGMGVNGIGQTKEHSQLIRSFGVDNLIVAVNKMDSVGYSKERFNFIKSQLGTFLRSCG
YKDSAIAWVPMSAMENENLMAAASDTRLSSWYDGNCLLKAIDTLPPPYRDISKPLRLPIC
DVISSHTLGQVAIGGKLEVGAIQSGSKVLVMPSAELAVVKTIERNSYGCNLARAGDNVAI
GLQGIDPSHVISGGVICHPDYPVSVASCLELKILVLDITVPILVGLQFELHIHHAKMSAC
MVKIVSLLEQKTGKASKKRPRFLTSRQTAVIEVKLEKEVCVEEFSNLKALGRVFLRSQGN
TIAVGIVSRVREQA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatcaagaaatcctggaccatggcaatgcaccatttgcgaacacggaaatgat
gcaagacattcatcatgcgagcaatgcggtgttcttcgagatttctcgctgtatttcaat
aatgcccttgaagtggatggcagagttaaacggagaggcatgcattctacggtatctgta
ctggcaagaactcttttctcaccatccagtgcaaagtcaaaagatgttgttttctctggt
ggctttaaagttagcagaactgcaacaggaaatacacaagctacgttggatgctcttcat
aggacatatatgacccgtaaagaacgtcgcattaacatagtgcctttcaagtttgataca
ccatctcctgatgacatggttgctacaggactaaaatcatcaagaagtattagaaaagtt
gacacagatgctccatgcattgatgtccatattgctgaaaagaaggtgatggataatgat
agttttattataaccgagaaggatacaactgcagacctgaattcgcttgtaaagtcgaat
ggatttggtgaaagtaagaatgtttctgttgatagtgaaaataaaacacttattttggac
catgagctacagcagttgagtttggagaggaagctgcaaaaaagtaaacccaagattaaa
aagccagtatctttatcactgtacaagccagaaccatggatgctccaacatgaagatgaa
gatatacctacacaattaaatatttctattgttggtcatgtcgattctgggaaatcaact
ctatgtggtcgtttgttacattcgctggggaagatttcaaaaaagcaaatgcataaatat
gagaaggaagctaaagaaaaggggaaaggatcatttgcatatgcttgggcaatggatgag
agtgctgatgaaagggagcgtggaattacaatgactgtcggtgttgcatactttgacact
aaaaattaccatgttgttttgctggacgcccccggtcacaaagattttgttcctaatatg
atatctggagcaacacagtctgatgcagctgtcctagttattgatgcttctataggatca
tttgaagcgggtatgggcgtcaatgggattggacagacaaaggagcactcacagcttatt
agaagctttggtgtggataatttgatagttgctgttaacaagatggattcagtgggatat
tcaaaagagcgatttaattttatcaaatcacagcttggtacttttctgcggtcatgtggt
tataaagattcagcaattgcctgggttccaatgagtgcaatggaaaatgaaaacctgatg
gcagcagcgtcagatactcgtctatcatcatggtatgatggaaattgccttctgaaagcc
attgacacattaccgcctccttatcgtgacatttcaaagccactacgccttccaatttgt
gatgtcatttcatcacatacattggggcaagttgcaattggtggtaaactagaggttgga
gcaatccaaagtggttctaaggtcctcgtcatgccttccgctgagttagctgtggtaaaa
actatcgagcggaattcctatggttgcaatttagcaagagctggggacaatgttgctatt
ggtttgcaagggatcgaccctagccatgtcatttctggaggagtcatttgccatccagat
tacccggtttccgtggcttcttgtttggagctgaaaatactggttctagatatcactgta
ccaatactggttgggctgcagtttgagctccacattcatcacgcgaagatgtctgcatgc
atggtgaaaatagtgtcgttgctggagcagaagaccggcaaggcctcaaagaagagaccg
cggtttctcacctcgagacagactgctgtaatcgaagtgaagctggagaaagaggtttgc
gtggaagaattttcaaacctgaaagctctgggccgagttttcctacgatcgcaaggaaac
accatcgcggtgggcattgtgagccgagtccgggaacaggcttag
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