Oryza brachyantha (malo sina): 102719748
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Entry
102719748 CDS
T02995
Name
(RefSeq) uncharacterized protein LOC102719748
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102719748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102719748
03400 DNA repair and recombination proteins [BR:
obr03400
]
102719748
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102719748
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102719748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
102719748
NCBI-ProteinID:
XP_006649951
UniProt:
J3LN10
LinkDB
All DBs
Position
3:9250180..9257591
Genome browser
AA seq
1460 aa
AA seq
DB search
MASPISGSDDDDGHLFAGVRFVLVGFDTVSESQYRSEMVRRSGVDAGRLGNGCTHVIVYG
LVYDDSVCVGARAEGKKVVTELWVEDSLERGVLADADRVLYWPVRDLKGIAGSETLHICL
TGYQRNGREDIMNMVSLMGAQFSKSLTPGVATHLICYKFEGEKYEAAKKVKLKYNLDIKL
VNHRWLEDCLKSWKILPVDDYSKSSWELEIMEAQAKDSEDEEDVVQKSFRNKTVGSTPNP
KGSVGTSANPVVNAPIQPAIISSDNIEMVAEKLQNIPGQIRKAEDALNRTHDITAQGTPK
TTGLVMSANTDFSTPGQVPLILSGNRGDAAVRDLNSTDQIQGNKDKDVGTRILDVTSSAL
GTPSSSKTVVSANHNLHSLNKTNSVEDHGNIGASKADLTTSSREILSSNVLDSSTVARGQ
SQDDYGAKCTLDAAGQSIINEKVTNHDVHLKSESNASLNINNKSYLKPTEKSVWTEQYSG
DHMTSPQGTEGSMLRADSSISTACKGAKISAKLADFQVLKGGENIQNENLLDGTHSQNKK
CLISPSCFKLQSGDMGKETGTWNSTFASRLSDTSEPAIWPSVGTNPSEAANVHLGKQQSG
SSKSRSRTALKHANPVDGVKLPQYSASETNVQPLQKPKELLTSSLSATVQDVKRCPDCSF
QNKDGECAQDSGDTMNQDGLPLMQDVHKMVRTSDISLHSLRNSKLIHCFGNDDTEMTNAL
DVSKNEAAVASHCKPEKVLHGENVKADCLKDFPGTSNNVLCQKGYLKKVASRNAMNAGTK
RPRSAASNVIDGPVINNDNAVVSDSEPDKMIAYEHIGETTKDSHDNATAAECRANSLDKV
PMDGVSTISKRLRNIHTKKNNTHASSNLESNKVISEENTGTGINHRKFVSNNATPEEHQT
NSPKKLPNTSVKNTVTKRFRASDTKMACESSVDKTETMAAKSLFGDLFTSQNIDDNPKKL
SSSASADGCGSLSPKNVSSGRVRNAVAKRKIKALEDKSDRKLGKISDAIVSAAKAVASRR
IEESSCNINKVTADQDSLEADGTRDVSGLFSKDTSVISRSKNLNNSRLRCSRRNKSISLD
DGKENMQGNGILSSKSNGRTGSMNSMFDANSMQNSANIFNEPVRIKGNKPALLITPEPTC
FILSGHRQQRKDYRSILRRLKARVCRDSHHWSYQATHFIAPDPLKRTEKFFAAAAAGKWI
LKTDYLTSCNEAGKLLDEEPFEWFGTGFNAGETISFEAPQKWRILRQQMGHGAFYGMQII
AYGQFVTPSLDTLKRAVRSGDGTILATSPPYTRFLNSDVDFAVVSSSMPSADAWVQQFIS
HNIPCISADYLVEYVCKPGHPLDRHVLFNTNDLANKALKRLLQNQQEVATDIVKPQEDGD
PDDMSCSVCGSTDRGEVMLICGTEDGSTGCGIGMHIDCCDPPMEAVPDDDWLCPKCEMPK
ATKKPAALRAASKSRVSRRR
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcccatcagcggcagcgacgacgatgacgggcacctcttcgccggcgtccgc
ttcgtcctcgtcgggttcgacaccgtatcggagtcccagtaccggtcggagatggtgcgg
cgcagcggcgtggatgcggggaggttgggcaacgggtgcacccacgtcatcgtctacggc
ctcgtctacgatgactcggtttgcgtgggggcgcgggcggaagggaagaaggtcgtcact
gagctttgggtggaagatagcttggaacggggagtgcttgccgatgccgatagggttttg
tattggccggtcagggatttaaagggaatagcagggagtgaaacattacacatttgcttg
acgggttaccaaagaaatggtcgcgaagatataatgaacatggtttctttgatgggagca
cagttctccaaatctttgacgccaggcgtagccactcatcttatttgctataaatttgaa
ggtgagaagtacgaggctgctaagaaggtgaagttgaagtacaacttggacatcaaactt
gttaatcaccgttggttggaagactgcttaaagtcttggaaaattcttccggtagatgat
tacagcaaaagtagttgggagctagagataatggaggcgcaagcgaaggactcagaagac
gaggaagatgtggtacaaaaatcatttagaaataagactgttggatccactcccaaccca
aaaggtagtgtgggaacttctgctaaccctgtggtgaatgcaccaattcagccagctatt
atttccagcgataatatagagatggttgccgaaaagcttcagaatattcctggtcagatc
aggaaagcagaagatgccctcaacaggacacatgatatcacagcccaaggaactcctaaa
actactggattggtgatgtctgctaacactgattttagcacacctggtcaggttccactt
attctcagtggcaacagaggggatgctgcagtaagagatttgaacagtacagatcagatc
caggggaacaaagacaaagatgttggcacaaggatactggatgttacatcaagtgcattg
ggcactccaagctcaagcaagacggttgtttctgctaaccataatctccattccttgaac
aagacaaattctgtggaggatcatggcaacattggtgctagcaaagctgacttaaccacc
tcatcaagagaaattctgtcttcaaatgtacttgattcatctactgttgccagaggacaa
agtcaagatgattatggagccaaatgcactcttgacgcagctggtcagtcaattattaat
gagaaggtcaccaatcatgatgttcatttgaagtcagaaagcaatgcttcgctcaatatc
aacaacaaaagttatttgaagcccacagagaagtcagtatggactgaacaatattcaggt
gaccatatgacatcacctcaggggactgaggggagcatgttgagagctgattctagtatc
tcgacagcatgtaaaggagcaaaaataagtgccaagctagctgacttccaggttctgaaa
ggtggtgaaaatatacagaatgagaatttactggatggtacacattctcaaaataagaag
tgcttgatctccccatcttgcttcaaactgcaaagtggtgatatggggaaggaaactggg
acatggaactctacctttgcaagtaggcttagtgacacatctgaaccagcaatttggcca
tctgtaggaacaaatccaagtgaagctgctaacgttcatttgggaaagcaacagtctggc
tcatctaaatcaagatctaggactgcactcaagcatgctaatccggttgatggagtcaag
cttcctcaatattctgcaagtgagacaaatgtgcagcctctgcagaaacccaaagaattg
ctcacatcaagcctttcagcaactgttcaggatgtaaaaagatgtccagattgctctttt
caaaacaaggatggggaatgtgcacaagatagtggtgatacaatgaatcaagatggcttg
ccactgatgcaagacgttcataaaatggtcagaacttctgacatatctttacacagttta
aggaattcaaaacttatccactgttttggaaatgatgatactgagatgactaatgcactt
gatgtcagcaaaaacgaagcagcagtggcttcacattgcaagcctgagaaagtgttacat
ggtgaaaatgtgaaggcagactgtcttaaagattttccaggtacttcaaacaatgttcta
tgtcaaaaaggttatctaaagaaagtggcatctcgtaatgcaatgaatgctggcacaaag
agacctcgtagtgctgctagcaatgtgatagatggtccagtgattaacaatgacaatgca
gtagtttctgactcagagccggataaaatgattgcttacgagcacattggtgaaaccact
aaagacagccatgataatgcaactgcagcagagtgcagagccaactctctggacaaagtt
cctatggatggagtgagtactatttccaaaaggctgcggaatattcacaccaagaaaaat
aatacacatgcatcttccaacttggaatccaataaggttatttctgaggaaaatactgga
actgggataaaccataggaagtttgtgagtaataatgcaacccctgaagaacatcaaaca
aattctccaaagaagttacctaataccagtgtgaaaaatacagttaccaagaggtttcgg
gcatctgacaccaaaatggcttgtgaatcatcagttgataaaactgaaacaatggctgcc
aagtcactgtttggtgacttatttacttcccaaaacattgacgataaccctaaaaagctt
tcaagtagtgcaagtgctgatggctgtggatcactctcccctaagaatgtatcatctggc
agagttaggaatgctgtggccaagaggaaaataaaagctctagaagacaagtcagacaga
aagcttggtaaaattagtgatgccattgtatctgcagctaaagctgtcgcatcaaggaga
attgaagaaagctcatgcaatatcaacaaagtaactgctgatcaagattctctggaggcc
gatggaacaagagatgtatctggcttattttccaaagatacttctgtgataagcaggtca
aaaaacttgaataactctaggttgagatgcagcagaagaaataaatctatttctttagac
gatggaaaggaaaacatgcaaggcaatggtattctcagttctaaatccaatggcagaact
ggtagtatgaattccatgtttgatgcaaattcaatgcagaacagtgcaaatatattcaat
gagcctgtaaggataaaaggaaataagccagccctcttgatcacacctgagcctacatgt
tttattttaagcggacatcgccaacagagaaaggattatagatcaatacttaggcgccta
aaggctcgagtttgcagggattcacatcattggtcataccaagcgacacattttattgcc
ccagatcctctcaagagaactgagaaattctttgcagctgctgcagccggcaagtggata
ctgaaaactgattacttgacctcttgcaatgaggctggcaaactgttggacgaagaacca
tttgaatggtttggtacgggctttaatgctggggaaacaatcagctttgaagctccccaa
aaatggcgtattttgagacagcagatgggccatggtgccttctatgggatgcagataatt
gcatatggacaattcgttactccatcgctggatacgctgaagcgtgcagtgcgatctggt
gatggcaccatcttagcgacctcgccaccgtacacacggttcttgaactctgacgtcgac
tttgctgtagtatcctcgagcatgccaagtgcagacgcatgggttcaacaattcatcagt
cacaatattccttgtatcagtgctgattatctggttgagtacgtctgcaagcctgggcat
ccgcttgacagacatgttctcttcaacacaaacgatctggccaacaaggccctcaaaagg
cttcttcaaaaccagcaagaggtggccacagatatagtgaagcctcaggaggacggagat
cccgatgacatgagctgctcggtgtgcgggagtacagaccggggcgaggtgatgctcatc
tgcggcaccgaggatggctcgaccggctgcggtatcggcatgcacatcgactgctgcgat
cctcccatggaagctgtcccagacgatgactggctgtgccccaagtgcgaaatgcccaaa
gcgaccaagaaacctgctgcgttacgcgcagccagcaaatcaagagtatccaggcgaagg
tga
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