Oryza brachyantha (malo sina): 102719821
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Entry
102719821 CDS
T02995
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102719821
Spliceosome [BR:
obr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
102719821
Other components
Complex C specific factors
102719821
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
102719821
NCBI-ProteinID:
XP_040385245
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All DBs
Position
12:15606833..15610601
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AA seq
847 aa
AA seq
DB search
MEEDAEGMDRFDMDGDFEGGHFGRDGEFYYRERRERAPQTRDDALYGVFAEGDSDYDSDD
DAGNRRRRRKRRRDDSEPDLTRPVHFQSAGKFMPTNEPEPEPEERPGLGASAASSSRFAA
AGAEDGVEEEEEQELDLPTAFGQRIAEGARARREERARERETAARRRQASGVAAGKPAAA
PGSLESNTKVAKMMAMMGYKTGMGLGKNEQGRVAPLEGTLRPKNAGLGSVEGFKEPKPFL
TKENLPPPPPSAPAKKEQQRWSKKASAKKGPVLTKNELLAMRTEQEQDEQPMVVQKVIDM
RGPQARVLTDLKGLNVEQEMEANDVPMPELQYNVRLLVDEAKADIVRLDAQLRREQEKVA
SLVREKEKVGKQEALQKRQLHVMETIAGVLEQVRVDDTAGVLSLEGLLKTFQELKACYVE
EFKMCSVAWIACRFAHPLLIRVFQGWQPLQNPLFGLEVMSSWKELLQGDQAYDFSGDVES
MAPYAQLVSEVILPAVRISGTNSWEARDPEPMLHFLESWERLLPPIVLQSILEHVIMPKL
SAAVDSWDPRREKVPIHVWVHPWLPMLGQRIYTLCHSIRYKLSSVLHVWQAHDASAYAVL
SPWKDVFDPASWEDLIVRYIIPKLKMALQEFQINPANQKLDQFNWVMIWASAIPVHHMVH
MLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTSGLDMM
NQAAEGLEVVQPGARENVGYLRATEKRQFDAAQQASQYTAYNAVPGAAMADLSFKESIQA
YAMEQGLLFMPRVGKFYNGMPVYEFGTVSICIDSVKRLLYAQLQEGIERWSAVSLTQLME
MNRKAII
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatgcggaggggatggatcgcttcgacatggacggcgacttcgagggcggc
cacttcggcagggacggcgagttctactacagggagcgccgggagcgggcgccccagacg
cgcgacgacgccctctacggcgtcttcgccgagggggactccgactacgactccgacgac
gacgccgggaaccgacgccgccgccgcaagcgccgcagggacgattccgagcccgacctc
acccgccccgtgcacttccagtccgccggcaagttcatgcccaccaatgagcccgagccg
gagccggaggagaggcccgggctcggagcctccgcggcgtcctcctcgaggttcgctgcc
gccggagctgaggatggggtggaggaggaggaggaacaggagctcgacctgcccacggcg
ttcgggcagcggatcgccgagggggcgcgcgcgaggcgggaggagagggcacgggagcgt
gagacggccgcgcgacgacgccaggcgtcgggggtggcggccggcaagccggcggcggct
ccggggagcctggagtccaacacgaaggtggccaagatgatggccatgatggggtacaag
acagggatggggcttggcaagaacgagcaaggtagggtcgcgccgctggaaggcacccta
cgccccaagaacgccggtctcggaagcgtcgaagggttcaaggagcccaagccgttcctt
actaaggagaatttgccgcctccgcctccgtcggcccctgccaagaaggagcagcagagg
tggtcgaagaaggccagtgcaaagaaaggtcctgtgttgacgaagaatgagttgctggcg
atgcgcactgagcaggagcaggacgagcaacccatggttgtccagaaggtgattgacatg
cgagggcctcaggcacgcgtgctaacagacttgaaggggctcaatgtagaacaggagatg
gaggcaaatgacgtgccgatgccggagttgcaatacaatgtgaggctgctagtcgatgag
gctaaggctgatattgtgaggctggatgcgcagctgcgtcgggagcaagagaaggtggca
agcttagtgcgggagaaggagaaagtgggaaaacaggaggctttgcagaaacgccaactg
catgttatggagacgattgcaggggtgctggagcaggtccgggtggacgatacagcaggt
gttctttctctcgaaggtttacttaagacctttcaggaattgaaggcatgctatgtggag
gagttcaagatgtgcagcgttgcatggattgcttgccggtttgctcatccattactaatc
cgagtcttccaggggtggcagccactgcagaatccattgtttggcttggaggtcatgtca
tcatggaaagaattgctgcagggggaccaagcatatgatttctcaggtgatgttgaatca
atggccccatatgcacaattagttagtgaggtcatcttaccagctgtgaggatatcggga
accaattcatgggaagctagggatccagaaccaatgctccactttcttgagtcatgggaa
cggttgctgcctcctatcgtgctgcagtcaatattggagcatgtcataatgccaaagctc
tcagctgcagttgattcttgggacccacgcagggagaaggtacctatccatgtatgggtg
catccgtggttgcctatgctagggcagaggatatataccttgtgccattctattcgatac
aaacttagtagtgttctccatgtttggcaagctcatgatgcttcagcttatgctgtgttg
tccccatggaaggatgtatttgatccagcaagctgggaagatttgattgtgcgctatatc
ataccaaaactgaagatggcactgcaagagtttcagatcaaccctgcaaaccagaaactc
gaccagttcaattgggtaatgatttgggcttctgcaatcccagtacaccatatggtccat
atgttggaagtagatttcttcagcaagtggcagcaggtcctgtaccattggttgtgttcg
ccaaatcctgatttcaatgagatcatgaactggtacaagggctggaagggcctttttcca
cctgagttgcttgccaatgagcgcatacgaatgcttttaacgtctggccttgacatgatg
aaccaagcagctgaaggccttgaggtggtgcaacctggcgctagggaaaatgttggctac
ttgagagcaacagagaagaggcaatttgatgcagcacagcaagcatcacaatacacagct
tataatgcggtgccaggggcagccatggcggatttgagcttcaaggagtctatccaggca
tatgcaatggaacaaggcttattgtttatgcctagagttggtaaattctataacggtatg
ccagtgtatgagttcggcacagtgagtatttgcatagactctgtgaagcgcctactgtat
gcacaactgcaagaaggaattgagagatggagtgctgtgtctctcacacaattgatggaa
atgaaccggaaggcaatcatttga
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