Oryza brachyantha (malo sina): 102719888
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Entry
102719888 CDS
T02995
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102719888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102719888
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102719888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102719888
NCBI-ProteinID:
XP_040382835
LinkDB
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Position
8:complement(845103..849874)
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AA seq
263 aa
AA seq
DB search
MSAAAATATTGTYSPAASAGEKRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGP
TTAASGSAYAEFGKTKVIVSVFGPRESKKTMMYSDTGRLNCNVSYTTFATPIRGQGTDNK
EYSAMLHKALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMYDLV
TSVSVSCFGKNIIIDPTSDEEAWQDGSLMVAYMPARKEITQLTLTGEWSDGKITNAVELC
MDACTKLCDILRERLKDASSLAE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcggcggctacggctactactgggacgtactccccggctgcgtccgccggg
gaaaagcggagggagaggaaggaggagctgcggcgccacctcgccgaggacgccgactgg
ccccgcgctgacggccgctccttccacgactgccgtcccgcatttatgcaaacagggcca
acaactgccgcatcaggatctgcctatgcagaatttgggaagacaaaggtcattgtgtca
gtgtttggaccaagagaaagcaaaaaaacaatgatgtacagtgataccggtagactcaat
tgcaatgtgagctatacaacatttgccacccctatacgtggacagggaacagacaacaag
gagtactctgcaatgcttcataaagccctggaaggcgcagtgatgcttcacacttttcca
aagaccactgttgatgtttttgccttggttcttgagtctggtggcagcgatcttcccatc
attatttcttgtgctagtcttgcattagctgatgccggaatcatgatgtatgatcttgtt
acatcagtatccgtgtcctgttttgggaagaacattatcattgatccaacctctgatgag
gaagcatggcaagacggcagccttatggtggcatacatgccagcccgaaaggagatcaca
cagttaacgcttactggagagtggtctgatggcaaaatcaccaatgcggtagagctctgc
atggatgcttgcactaagctctgtgacatactgcgggagcgcttgaaagatgcttccagc
ttggctgagtga
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