Oryza brachyantha (malo sina): 102720086
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Entry
102720086 CDS
T02995
Name
(RefSeq) FACT complex subunit SSRP1-A
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102720086
03036 Chromosome and associated proteins [BR:
obr03036
]
102720086
Transcription factors [BR:
obr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
102720086
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
102720086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Motif
Other DBs
NCBI-GeneID:
102720086
NCBI-ProteinID:
XP_006643849
UniProt:
J3KX38
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Position
1:3307122..3313441
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AA seq
641 aa
AA seq
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MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY
QLGVRTKDGLFYKFIGFREQDVSSVTNFMQKNMGLSPDEKQLSVSGQNWGGVDINGNMLT
FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFV
GDENRTAAQILWETIMGVADVDSSEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTIVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALSR
EVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRSEYHNLFNFINGKHLKIMNLGDGQGASGGVTAVLRDTDDDAVDPHLERIKNQAGDEES
DEEDEDFVADKDDSGSPTDDSGGEDSDASDSGGEKEKLSKKEAISSKPPVKRKAKGRDEE
GSEKRKPKKKKDPNAPKRAMTPFMYFSMAERATMKNNNPDLPTTEIAKKLGEMWQKMTAE
EKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaacatcctcctcggcggccgcgccggctcgaatcct
ggccagtttaaggtgtattctggaggtcttgcatggaagagacagggtggaggaaagacc
attgagattgagaaatctgatttaacgtcggtgacatggatgaaagtccctagagcctat
cagcttggagtcaggaccaaagatggcctgttctacaagtttattggcttccgtgaacag
gatgtaagcagtgtaaccaatttcatgcaaaagaatatgggcctctcaccagatgagaaa
cagctttctgtcagtggtcagaattggggaggggtcgatataaatggaaatatgcttacc
ttcatggttggttcaaagcaagcatttgaagtgtcgctagcagacgtctcacaaacccaa
atgcaagggaaaacagatgttctcttagagtttcatgttgatgatactactgggggtaat
gagaaagattcgcttatggatttaagctttcatgtccctacttcaaatactcaatttgtt
ggagatgagaatcgcactgcagctcagattctatgggaaacaataatgggtgttgctgat
gttgattcttctgaagaggcagttgttacctttgaaggaattgctattcttacaccaaga
ggacgttatagtgttgagcttcatctgtcatttttgcgtctccaaggacaagctaatgat
tttaaaatccaatatagcagcattgttcgcctctttcttttgccaaagtcaaacaatcct
catacaattgtagttgtcactcttgatccaccaatccgcaaaggacagacactgtatccg
cacattgtcattcagtttgagacagaggcggtggttgaaagaaatctagcattaagtaga
gaggttctggctgaaaaatacaaagacaggctggaggaatcatacaagggtctaatacat
gaggtattcaccaaagttcttcgtggtctatctggtgccaaagtcacaaggccaggttct
ttcagaagttgccaagatggatatgcagttaaatcgtccctcaaagctgaagatggactg
ttgtatccacttgaaaagggtttcttctttttgccaaagcctcctacactcattctacat
gaagagattgagtttgttgaatttgaacgtcatggtgctgggggtgccagtatttcatct
cactatttcgacctcctagtcaagctgaaaaatgatcaagaacatctcttcagaaatatt
cagaggagtgaataccataacctcttcaacttcatcaatggaaagcacttgaaaataatg
aaccttggagatggtcaaggtgcaagtggtggggttacagctgttctacgagacactgat
gatgatgctgttgatccacatctagaacgaattaaaaatcaggctggggatgaggaaagt
gatgaagaggatgaagattttgttgcggacaaggatgatagtggatcacctactgatgat
tctggtggggaggattcagatgctagtgacagtgggggcgaaaaagagaaattatccaaa
aaggaagctattagttcaaagccacctgtgaagaggaaggctaagggcagggatgaagaa
ggttcagagaaaagaaaaccaaagaagaaaaaggatcctaatgcccccaaaagggcgatg
acaccattcatgtacttctcaatggccgaacgagcaactatgaagaacaataatccagat
ttgcctacaaccgagattgcaaagaagcttggggagatgtggcaaaagatgacagctgaa
gagaagcagccttacattcaacagtctcaagttgacaaaaaacgatacgaaaaggaatct
gctgtttaccgtggtgcagctgccatggatgtggattctggctccggaggcaatgagtct
gactag
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