Oryza brachyantha (malo sina): 102720109
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Entry
102720109 CDS
T02995
Name
(RefSeq) uncharacterized protein LOC102720109
KO
K15200
general transcription factor 3C polypeptide 2
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102720109
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
102720109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
AT_hook
TFIIIC_delta
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
ASA1
Motif
Other DBs
NCBI-GeneID:
102720109
NCBI-ProteinID:
XP_006646494
LinkDB
All DBs
Position
1:complement(28429691..28440670)
Genome browser
AA seq
1134 aa
AA seq
DB search
MAAPAEATGAPPPTEREEVKDGVEVCLFEESPDAFSRAVRAISELTAGEPEPDFPDAEVE
RLASSITFLREWRHFSYEPKGISFTCKARSAPSRVDSHKINLPQFSSASVPQITHLDDGN
SKTDSSDFVLFAGGNVWALDWCPRLCDRPTNCEYLAVAAHPPGSSYHKIGMPLIGRGIIQ
VWCLLAPSEEDHQPSIALNKNNSSNPPRPRGRPRKTSTTSDDHLEPSLKRPRGRPRKYPL
TIAKVKDSSQNDRSQDFGLTDPLVSSAVNLCDAVVACAMPTVKSVEPTPRRGRGRPRKKP
VEKKGLSGTELTEDMSTALICTEPKRKRGRPRKYPAPINSKHLPGTDNELGNDTVSLPGS
IDCSLGPTETTGSGANLTPVAVDAAFPVPSSSSAICDRKSGQRGRQQPEKEVSHGAPCWE
TITNDPNSMPSGHPDVGSMLPTYILSNSSSKSESGGTRVRGQPRNKLFPSTTSCLFATGM
KTPKQASILTNSDNLIVLAKSDGDVISDDMGICLAKCKDESCAKRGRGRPKKKQILTRCT
STECNDEEQKITIPESSYNAALVGNCKKESCPRKSRLKDKKKSAFDEHSSLAFSVEAQKM
NISSASIMSSSCLALIGSCVNEDTSNEVGLIGYKSGPVGCDIMKMREINTFESAQANQAV
SVPFENGAPIIEGLEDTEVTPLKESTKVNNMICSAEKIISPVPKDVSLPRVVLCLAHNGK
VAWDIKWKPPLANQSEQKSRLGFLAVLLGNGSIEVWEVPSPSMIQKIYSSSLKEGTDPRF
LKLQPVFSCAKVKCGNRQSIPLTVDWSPSHDMILAGCHDGTVALWKFSTNLSFEGSKPFM
CVTAESAPIRTVSWAPSMSEENVNTFVTAGEDGLKFWDLRDPYRPLWELTTAPRAVLSLQ
WLKDARGIVISLEDGTLKFLSLSRTANDVSVTGRPFAGTKTQGVSTYQLSEYLIWSVHAS
EITGYAAYCVADGTAVFFELTPRFWEKEPGRNRVPYFLCGSLTEVGTTIKIDITSQNSPL
SNVPLGGKRAAKTCKDVGKLLTYSEYNCTINSDVKYGQQDVPDKGKETDAAVLAPSMQEN
IGASTSRGSESPESFEVFPPKAVALHRLRWNMNKGSERWLCYGGAAGIVRCQRI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcggaggcgacgggggcgccacccccgactgaaagagaggaggttaag
gacggcgtcgaagtctgcctgtttgaagaatcaccagatgccttctccagagcggtgcgc
gccatctcggagctcaccgctggagagcccgagccggactttcccgacgctgaagtcgag
cggctcgcttcctcaataactttcctcagagaatggaggcacttctcctatgagccaaaa
ggtattagtttcacttgcaaggccagatcagctccatccagagtagactcacacaagata
aacttaccacagttctcgtctgcatctgttccccagatcacacacctagacgatgggaat
tctaaaacagacagctcagattttgttttatttgctgggggcaacgtttgggcattggac
tggtgcccaaggttgtgtgacaggcctacaaactgtgagtatcttgctgttgctgctcac
cctcctggttcttcttaccataaaattggtatgccattaattgggagaggtataattcaa
gtttggtgtctcctagcaccgtctgaagaggatcatcagccatctattgcactcaataaa
aacaattcatccaatccaccaagaccaagaggaaggccaagaaagactagcacaacttct
gatgatcacttggaaccaagtctgaaaagaccaaggggcagaccaagaaaatatccactg
acaattgccaaagtgaaagattcatcccaaaacgatagaagtcaagattttggtcttact
gatcctcttgtcagttcagcagttaatttgtgtgatgctgtagtagcttgtgccatgcca
accgttaagtctgtggaaccaactccaagaagaggtagagggcgacctaggaaaaaacca
gttgagaaaaaaggtttgtctggcactgaactaacagaagatatgtctacagctttaatc
tgtacagagccaaagagaaaaaggggaagaccccgaaagtatccagctccaatcaacagc
aaacatcttccaggcactgataatgaattaggaaatgacaccgtctctctacctggttca
attgattgtagtttgggccccactgaaacaacagggtctggtgctaatttaacccctgtt
gcagttgatgcagccttcccagttccatcttcatctagtgctatttgtgatagaaagtca
ggtcagaggggtagacaacagcctgaaaaggaagtaagtcatggtgcaccttgctgggaa
accataacaaatgatccaaattctatgccatctggacatcctgatgtaggatccatgttg
cctacatatattttatctaattcaagcagcaagagtgaatcaggtggtacaagagtgagg
ggacaacctaggaataaactatttccaagtacaaccagctgtttatttgctactggcatg
aagaccccaaagcaagcttctattctgaccaattcagacaatctcatcgtcttggccaag
agtgatggtgatgttatatcagatgatatgggcatatgccttgcaaaatgcaaggacgaa
tcgtgtgccaaaaggggtagaggcagacctaaaaagaagcaaattttaaccagatgcact
tctacagaatgtaatgacgaagagcaaaaaattacaattcccgagtcaagctacaatgca
gccttagttggaaattgcaagaaagaatcatgtcccagaaagagtagattgaaagataaa
aagaaatctgcttttgatgaacacagttcactggcttttagtgttgaagcacagaagatg
aacatatcttctgcatcaatcatgtcaagcagttgcttggccttgataggatcatgtgta
aatgaagatacatctaatgaggttggtttgattggatataagagtggacctgttggatgt
gacatcatgaaaatgcgtgaaatcaatacttttgaaagtgcacaggcaaatcaggctgta
tctgttccttttgaaaatggtgctccaattattgaaggactggaagatacagaggtgact
ccactcaaagaatcaactaaagtaaataatatgatttgttctgcagaaaagatcatttct
cctgtcccaaaagacgtctctctaccaagggttgtcttatgtttagcccataatggaaaa
gttgcttgggacatcaaatggaaacctcctttagcaaatcagtcggaacagaaatctcgt
ttgggttttctggcggtactcttggggaatggctcgattgaagtatgggaagttccttct
ccaagcatgattcagaaaatttattcctcttctttaaaggagggtactgaccctcgtttt
ttaaagttgcagcctgtgtttagctgtgccaaagtaaagtgtgggaacagacaaagcatt
cccttgacagttgattggtcaccctctcatgacatgatattggcgggatgtcatgatgga
acggttgctttatggaagttctcgacaaacttgtcatttgaaggttcaaaaccttttatg
tgtgtaactgctgaatctgctcccatcagaaccgtgtcatgggcaccatctatgagcgag
gaaaatgtgaatacctttgtcactgctggagaggatggtctgaaattctgggatttaaga
gatccatatcgtcctctttgggagttaactactgctccaagggctgtattaagtcttcaa
tggttgaaggatgcgagaggtattgtcatatcattggaagatggcacattgaaattcctt
agcttatcaagaactgcaaatgatgtttctgttactggaaggccatttgctggaactaaa
actcagggtgtttctacctatcaattgtctgaatatttgatctggagtgtccatgcctca
gaaattacaggctatgcagcttattgtgtggcagatggaactgctgttttctttgagctt
actccgagattctgggaaaaggaacctgggaggaaccgtgtaccatattttctttgtggt
tcattaacagaggtgggaacaaccattaaaattgatatcacatcacagaactctcctttg
tcaaatgttcctctggggggcaaaagggctgccaaaacttgcaaagatgtagggaaactt
cttacctactcagagtacaattgtactataaactcggatgtcaaatatggtcaacaagat
gtacctgataaaggaaaagaaactgatgctgcagttttagctccttcaatgcaagagaat
atcggcgcaagcaccagcaggggtagtgaatcccctgaaagttttgaggtctttcctcct
aaagctgtagcattgcatcgattgagatggaacatgaataagggtagcgagagatggtta
tgctatgggggggctgcaggcattgtccgatgtcagaggatctaa
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