Oryza brachyantha (malo sina): 102720157
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Entry
102720157 CDS
T02995
Name
(RefSeq) zinc finger CCCH domain-containing protein 43-like
KO
K03260
translation initiation factor 4G
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102720157
03012 Translation factors [BR:
obr03012
]
102720157
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102720157
mRNA cycle factors
Stress granule specific factors
102720157
Translation factors [BR:
obr03012
]
Eukaryotic type
Initiation factors
eIF-4
102720157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
zf-CCCH
zf-CCCH_2
zf_CCCH_4
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
102720157
NCBI-ProteinID:
XP_015693598
LinkDB
All DBs
Position
6:13182701..13188369
Genome browser
AA seq
692 aa
AA seq
DB search
MPPPRDDDRPAAAAGAGEAKPAAEEHPRRPGQHDCSYYVKFGSCKFGMRCVYNHPGGQQS
SEAGAGEKVEMKHPRRPGQPDCLHYLRFVTCKYGMDCKLNHPPGRITQQMPMYFLAKACN
YQHNGGKTEVEQVNLNLVGLPLRPGAGLCSYYMNRGTCKFGTTCRFHHPDRGSDQEKWVA
SGHANQASSQKNIYSVLDHGESNEQANPSQDVDQPGNSLFQPSKGICYTRDQLLQLHQII
DPPKDIFDLMEDMKELLVGDQMSVRNEPNYVQIPWYKRFDKDSRDWHSRSAETQVVAGEG
KSWDNIHETKESYELGWKKKEQNKYHQSSFQYVPKVQVATTSARPTTEVRWSIRRSNLSD
KDGVLKAVKGILNTLTPEKFDLLKGQLLAAGITGPDVLKDVVNLMLEKAVAEPTFCPMFA
QLCSFLNEHLTADADGEQITFKQELSNICEEAFGISCNIRNEIFKLTRPDQEMERRNKER
LVKLQTLGSICVLRDLLKQNMVADKIVHHIVQAVMDCEKFQFDPLQSVDLLNVIFEGRMG
SVPAVNQANTGVNAIIGTKKCSLAANDLTIIDKDVDMRNEEATTLGRQSSEVPDNSMDRQ
KCFADAEYSHLVQNENGKLTNSEASVRMGSVGFGISEIMEMVVDAGANEGSDEHFIATML
FVKPEYREIFLTLTTPRVRLGWLKRMCKVKQE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcctcgggatgacgaccggccagctgctgcggccggcgccggcgaggcgaag
ccggcggcggaggagcacccgcggcggcccgggcagcacgactgcagctactacgtcaag
ttcgggagctgcaagttcgggatgaggtgcgtgtacaaccaccccggggggcagcagagc
tccgaagcaggcgccggcgagaaggtggagatgaagcacccgcggcggcccgggcagccg
gactgcctccactacctgcggttcgtgacatgcaagtacgggatggactgcaagctcaac
catccgcctggacgcatcacgcagcagatgccaatgtactttcttgcgaaagcatgcaac
taccaacataatggaggcaaaacagaagttgagcaagtaaacctaaaccttgttgggctt
ccacttcgtccaggggcaggattgtgttcatactatatgaataggggaacctgcaaattt
gggacaacctgcaggtttcaccacccagatcgaggctcagaccaggagaagtgggttgct
tcaggccatgccaatcaagcatcctctcaaaagaacatttactcggtgcttgatcacgga
gaatcgaatgagcaggctaatccatctcaagatgtcgatcaacctgggaattcactcttt
caaccttctaaaggaatctgttacacaagggatcaacttcttcaactgcatcagattatc
gatccacctaaggacatcttcgaccttatggaagatatgaaggaactccttgttggtgat
caaatgtcggttcgcaatgaaccaaattatgtacaaattccatggtacaaacgctttgat
aaggacagccgtgactggcattcaaggtctgcagaaactcaggtggttgctggggaaggg
aaatcttgggacaacatccatgaaacaaaagaatcctatgagttagggtggaaaaaaaaa
gagcaaaacaagtatcaccaatcaagcttccagtatgttcctaaagttcaggttgctacc
acctcagcacgtcctacgactgaagtccgttggtcaatcaggagaagcaatctctctgac
aaagatggtgtcctgaaagcagtgaaaggtatactgaacacattgacacccgagaagttt
gatctactgaagggacagttactagcagctggaatcactggaccagatgttttaaaggat
gtggtaaatcttatgttagaaaaggctgttgctgagccaaccttctgtccaatgtttgcg
caactttgctcttttctgaatgaacacctcacagctgatgctgatggtgagcaaattacg
ttcaaacaagaactgtctaatatatgtgaagaagcatttggaatttcttgcaatatacgg
aatgagatcttcaaattgacaagaccagaccaagagatggagagacggaataaagaaagg
ctagtgaaacttcaaacactagggagcatttgtgttttgcgtgatctgctcaagcaaaat
atggtcgcagataagatagtacatcacattgttcaggccgtaatggattgtgaaaaattt
cagtttgaccctctccaaagtgttgatttgttaaatgtaattttcgagggtaggatgggt
tcagttcctgcagtaaatcaagctaatacgggtgtcaatgctatcattggcaccaagaag
tgttcccttgcagcaaatgatctcacgatcatcgacaaggatgtcgacatgcgaaatgaa
gaagctactacattagggagacaatctagtgaagtcccagataattcgatggatcgtcag
aaatgttttgccgatgcagagtacagtcatctcgttcagaatgagaacggcaaattgacc
aattcagaagcttcagtgaggatgggttcagtaggatttggcatttctgagatcatggag
atggttgttgatgctggagctaatgaaggcagcgacgagcatttcattgctacaatgtta
tttgttaaacctgaatatagggaaatatttcttaccctcactactcctcgggtaaggctt
gggtggctgaaaaggatgtgcaaagtgaagcaggaataa
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