Oryza brachyantha (malo sina): 102720169
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Entry
102720169 CDS
T02995
Name
(RefSeq) RNA-binding protein 208
KO
K13201
nucleolysin TIA-1/TIAR
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102720169
03041 Spliceosome [BR:
obr03041
]
102720169
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102720169
Spliceosome [BR:
obr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102720169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_10
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
102720169
NCBI-ProteinID:
XP_006659606
UniProt:
J3MUH4
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All DBs
Position
8:complement(16255746..16261765)
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AA seq
444 aa
AA seq
DB search
MNGAGGNHQQQQQQRLRQQQQQQALLMQQALQQQQYQSGVLAAAAAAAMTQMEPISNGNL
PPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSA
ALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPS
CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNSEEKQ
ETDNHNAVVLTNGSASNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFY
NLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPPGTS
SKPLPPPLPSYQPVPMAGVPQGFTAAELVAYQRQLALSQAAAGQIAGQHGLAGQVSAGLL
AAGSQALYDGYPNQSSAQQLMYYN
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccggcgggaaccaccagcaacagcagcagcagcggctgaggcagcagcag
cagcagcaggcgctcctgatgcagcaggcgctgcagcagcagcagtaccagtccggcgtc
ctcgcggcggcggcggcggcggccatgacccagatggagcctatttcaaatggcaatctc
ccccctgggtttgatccatccacttgtcgcagtgtgtatgtcggtaatgtgcaccctaat
gttactgagagtcttctaatcgaagttttccagagttctggccttgtggaaagatgcaag
ctcattcggaaggagaagtcttcctttgggtttgttgactattatgatcggcggtcagca
gctcttgcaataatgacccttcatggtcgtcacatatgtggccaagcaatcaaggtgaat
tgggcgtatgcaagtacgcagagggaggatacatctgggcatttccatatttttgttggc
gatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagcatatccttct
tgttctgatgctcgagtcatgtgggataacaaaactggacgctccagaggttatggtttt
gtctccttccgtaatcaacaggaagctgagacagctataactgaaatgactggcaaatgg
cttggaagcagacaaataaggtgtaactgggcaacaaagaacaattcagaagagaaacaa
gaaactgacaatcataatgcggttgtactaacaaacggcagtgccagtaatccaggaatg
gaggcaagccaggacactggaagtaaagaaaatccagagaacaatcctgattgtactacg
gtgtatgttggcaaccttgggcatgaggttaaccgagatgagcttcaccgccacttctat
aatttaggcgttggggctatcgaggaagttcgtgttcaacaggataaaggatttggcttt
gtgagatacagtaaccatggcgaagcagcattagctattcagatggccaatggattggta
gtgcgcggaaagccgatcaagtgctcatggggcaacaaacctaccccacctggtacatct
tctaagccactgccgccaccgcttccttcgtatcaaccggtaccaatggcaggcgtgccg
caaggcttcacggcagctgagctcgtggcatatcagaggcaacttgccttgagccaggct
gcagctgggcagattgctggtcagcatggccttgctgggcaggtatctgcagggcttctt
gctgctggctcccaggctctctacgacggctacccgaaccagtcatcggcgcaacagctc
atgtactacaactag
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