Oryza brachyantha (malo sina): 102720249
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Entry
102720249 CDS
T02995
Name
(RefSeq) protein SMG9-like isoform X1
KO
K18735
protein SMG9
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102720249
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102720249
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
RsgA_GTPase
ABC_tran
AAA_18
AAA_29
Dynamin_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
102720249
NCBI-ProteinID:
XP_006656567
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All DBs
Position
6:599289..602429
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AA seq
410 aa
AA seq
DB search
MAAGPPPLAGAGDRGSSSHPPPPPPPKILLAKPPLPHPSSSGADDDGGGGGGAGRSRQAT
TQPGSLSFVSDAWEVHTDKILPYLTENNDFMVIGVIGPTGVGKSTIMNELYGYDGSSPGM
LPPFATQTEEIKAMAKHCTAGIDIRISNERVILLDTQPVFSPSILIDMMKPDGSSAIPIL
SGDPLSADLAHELMGIQLGVFLASVCNILLVVSEGINDLSMWDLMLTVDLLKHNIPDPSL
LTSSTTQDKENKNDNQSGIEDYIADLCFVHAGLRNQDFSPSKLMFLRKVLEKHFNSSSFS
IGSSGATPQVCDPSVPSSMKVEDLRSNQQDIYLLPSRTPDNSKNFEYGTCPSMLGMLRDQ
ILSRPSRPFSKNLTERDWLRSSAKIWDMVKRSPVISEYCKALQDSGFFRK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggaccgccgccgctcgccggcgccggggaccggggctcctcctcccacccg
cctccgcctcctccgccgaagatcctgctcgccaagcctccgctgccgcatccctcgtcc
tccggcgccgacgacgacggcggcggcggagggggcgcgggccgctcgcgccaggcgacg
acgcagcctggctcgctcagcttcgtctccgacgcgtgggaggtccacaccgacaagatc
ctcccgtatttgaccgagaacaatgatttcatggtgattggagtaattggtccaaccggt
gtgggcaagtcaaccatcatgaatgagctttatggatatgacggaagctcacctggaatg
cttcctccttttgctacacaaactgaggaaatcaaagcgatggctaagcactgtactgct
ggcattgacatcaggatctctaatgaacgtgttatactccttgacactcagccagtattc
agtccctccatactaattgatatgatgaagcctgacggttcatccgcaattcctattctc
agtggtgatccattatcagcagacctagctcatgagttaatgggaatacagcttggtgtt
ttcctggcgtctgtttgtaatattttgttggtcgtatcggaagggattaatgatttgtcc
atgtgggacctcatgcttacggttgatttactgaagcacaacatacccgatccatcatta
ttgacctcatcaactacccaagacaaggaaaacaaaaatgataaccaatcaggcattgaa
gattacatagctgatctttgttttgtgcatgctggattacggaaccaggacttttctcct
tcaaaactcatgtttctgaggaaagttcttgagaaacacttcaactcgtcctcctttagc
attggaagctccggggcaacacctcaagtttgtgacccttcagttccttcaagcatgaaa
gttgaggatttgaggtccaatcagcaggacatatatcttcttccatcaagaacacctgat
aactcaaaaaattttgagtatgggacatgtccatccatgctagggatgcttcgtgatcag
atcctatcaaggccatcaaggccattctcgaagaatctaacagagcgtgactggttgaga
agctcagctaagatctgggacatggtgaagagatctcccgtcatctcagaatattgcaaa
gcacttcaggattcagggtttttcagaaagtag
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