Oryza brachyantha (malo sina): 102720268
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Entry
102720268 CDS
T02995
Name
(RefSeq) probable ribosomal RNA small subunit methyltransferase B isoform X1
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102720268
Enzymes [BR:
obr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
102720268
Ribosome biogenesis [BR:
obr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
102720268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
102720268
NCBI-ProteinID:
XP_006661349
LinkDB
All DBs
Position
9:11672761..11696824
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AA seq
554 aa
AA seq
DB search
MMEGALALPQFRSRVGVGSRILLSASNPGAACGSSGASGRSRVSRVHPGAYPRTAGRGRT
WKPDSPEASPRRSGRTKISTVNLEVSHHRAVAAVRLLRIEKGKAFVDLLNEKGNGSGENE
MSYVERTLGFSTRCLDNRDIRLVTVIVAGTVRWKRYLDYLIMSLCSEEKMFREMEPLLLQ
ILRIGFFEILKLNVPAYAAVDENVRLAKVALRPGAGNLVNAILRKLLLLKETNSLPLPKI
EGDDRAQARALSIIYSHPVWMVRRWIRFLGKDEALKLMKWNNSDPHFSLRVNTANGYTRA
DLIDRLESLQVHYEKSTMDEFVRIQEGMQTVLQAGLLKEGMCAVQDESAGLVVSVVDPQP
GETIIDCCAAPGGKTLFMAARLSGQGKIQALDVNKGRLRILMEAAKLHNLDAMISDIHAD
LRLYAKETTVKYDKVLLDAPCSGLGVLSKRADLRWNRQFEDLEELTCLQDELLDSASMLV
KPGGILFYSTCSIDPEENEHRITAFVQRHPDFVPQSVHGYVPAEFVTKEGFYSSSPTKHS
IDGAFAARLVQSVF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggggcgctcgccctcccgcagttccgctcgcgcgtcggcgtcggctcgcgt
atcctgctctccgccagtaaccccggcgccgcctgcggcagctccggcgcctccgggagg
agtagggtttcgagggttcatccgggagcgtatccgaggactgcagggaggggtaggact
tggaagcctgacagcccggaggcgtcacctcgccgatcagggaggactaagatttcaact
gtaaatttggaggtgtcccatcacagagcagttgcagcagtgaggttgctaagaattgag
aaggggaaggcatttgtggaccttttgaatgagaaaggaaatggttctggtgagaatgag
atgagctatgtagaaaggacgctagggttcagtacacggtgtttggataacagggatata
agattggttactgtcatagttgctggaactgtgcgctggaaacgataccttgattatctt
atcatgtcactctgcagtgaggagaagatgttcagggagatggagccgctacttctgcag
atattgcgaattggcttctttgaaattctcaagctcaatgtgccagcttatgctgctgtt
gatgagaatgtaaggcttgctaaagtagctttaaggcctggtgctgggaacctggtgaat
gcaattctgcgtaaacttctactgctaaaggagacaaactctcttcctcttccaaagata
gaaggtgatgaccgtgcccaagctcgtgcactttccattatttattctcatcctgtttgg
atggtgagaagatggattcgttttcttggcaaagacgaagctctaaaattaatgaaatgg
aacaacagtgatcctcatttcagtttaagggtcaatacagcgaatgggtatacaagggct
gatcttatagatcgattggaaagtttgcaggttcattacgagaagtccactatggatgaa
tttgtccgtattcaggagggaatgcagacagtcctgcaagctggactactgaaagaaggc
atgtgtgctgtgcaggatgagagtgcaggtcttgtcgtgtctgtcgttgatccacaacct
ggggaaacaatcattgattgttgtgctgcgcctggtgggaaaacattgttcatggcagcg
cgtttgtcgggacaagggaagatacaagcacttgacgtaaacaaaggtcgattgagaatt
ctcatggaggcagcaaagttgcacaatcttgatgctatgatcagtgacatccatgctgat
cttcgactatatgctaaggaaacaactgtcaaatatgacaaggtactgttggatgctcca
tgctctgggctaggagttctttccaagagggcagacttgcggtggaatagacaatttgaa
gatttggaggaattaacgtgtttgcaagatgagcttcttgattcagcatcgatgttggta
aaacctggtggtatattattctacagtacatgttccattgatcctgaagaaaatgaacac
aggattactgcttttgttcagaggcatccggactttgtcccacagagtgtgcatggatat
gttcctgctgaatttgtcacaaaggaaggtttctattcctcaagtccaactaagcattct
attgatggggcatttgctgctcgtcttgttcagtcagtgttctag
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