Oryza brachyantha (malo sina): 102720815
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Entry
102720815 CDS
T02995
Name
(RefSeq) protein TSS
KO
K03255
protein TIF31
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
obr03012
]
102720815
Translation factors [BR:
obr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102720815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
Motif
Other DBs
NCBI-GeneID:
102720815
NCBI-ProteinID:
XP_040381956
LinkDB
All DBs
Position
7:8399792..8418240
Genome browser
AA seq
1922 aa
AA seq
DB search
MAPKSKRGKAKGEKKKKDEKVLPVAIDITVNLPDQSLVILKGISTDRIIDVRRLLCVNTA
TCAITNYSLSHELRDGRLKDGADIATLKPCTLTLVEEEYDEESAVAHIRRLLDIVACTTS
FGPPPPPPPPPSPKDAPADSAKDPTSGSSKASTPGRRTGSPPPPAAGQKDAATKDAAAAA
SSASAELEAEMSGACPRLGAFYEFFSLANLTPPLHFIRRVAQPRQEEQPSDDHLFFLEAK
LCNGKFVVVEARKKGFFSLGKQRVLCHNLVDLLRHLSRAFDNAYEDLMKAFLERNKFGNF
PYGFRANTWLVPPIAAQSPSTFPPLPSEDETWGGNGGGWGRDGKSDMLPWADEFLYLTSM
PCKTPEEREIRDRRAFLLHSLFVDVAIFRAIAAVRHAMEIKDVSASGNIDEVLHSETVGN
FSITVTRDSSDASCKLDTKIDGSRATGMDFKHLAERNLLKGITADENTAAHDVESLGIVN
LRYCGYVAVVKVNNIEKAKVNSSIKPIDITDQPEGGAHALNINSLRMLLNEANSTGEKKM
LNLPQIHKQEELTAAHTFVENLLKESLQKLEEEESGKQPFMRWELGACWVQHLQDQKNSD
KDKKQGGEKEKKKVVDKAAKEAKIEGLGKPLKALKNSKNNVDAAEKGSSLGEKAMSDGTS
SAESQKIKPSAVELPQGESNASENESFLKDLLSDSAFTRLKDSETGLHQKSPPELIEMAL
KYYDEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGRVVKLSEKLSHVQSLCV
HEMIVRAFKHIVRSAIAATSDLRQLALAIASALNLLLGVPEPEASTSSHDVRPLVWKWLV
AFLKKRYEFELTEQHYHDVRKYALLRGLCHKVGIELAPRDFVMDSAFPFQKQDIISLVPV
HKQVACSSADGRQLLESSKTALDKGKLEDAVNYGTKALAKLITVCGPYHRMTAGAYSLLA
VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKR
ALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAA
SYHAIAIALSLMEAYSLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKVIEQQEA
ARNGTRKPDASIASKGHLSVSDLLDYINPNEENKGRDSESIKRRYSSIKVLSNTIGGSNV
PSPEVSPRDSAAANVDEEKQIIEPSQDDTVNIVTEAEIKLNLRSVEYPASSEQPVERAEV
ITDLPEDVVQEEIVEPEDGWQPVQRPKSAGGSGKQMKHFNPTTRKMYDPDNHASQYTSQY
KARNSYSNNRYYFLKKRTVVPATYTDPHQHVKVQTSSARFGRKIYKAVTYRIKPGSTSTE
AQDASADQMSGKAESQMAYSQVHNTTIDHKENEPHGTLVASSGNAPSYKDVALARPGTIA
KAQIQKLRDDVLQNQPSLGQIIAQEMKDSLVDTHQVEQGSVSVDINNPNEVSNIPEEIQH
SGDMKVSDRELDTGNIDKGRLPNDEKSLDGSEPANGHTSQEPVSCSNENVAIEFTESSNS
AKDERNRKPDMVIFEETLPTSIEPITVSASAVNADAHGGAGSEKSKPNLLLNSIDLREMP
NKKLSAAAPPFNPSPPAILSPLAVSVGLPPPGAIPGVAPWPVNVPMHPGHSTMVPSGPPL
CTSPHHLYPPAPRSPNLLHPVPFIYPPYSQPQVIPSSTFPMNTNIFRPNHYGWQPYMNAP
STEFVPGSAWSSSHPVDFTPTRHVVDPISQSLADTHIQSDAAVVSIGPSLDSSAMAVKEE
MEATMVGSGNLVSNKHPGDDQDKQLKDAVRIELSPDMPGEKAHGITATDHSRGNMKNEDE
GSFRIYVKGKSRRKQTLRIPISLLNKTYGSRSFKFVYNRVVRENDIFRPSTASFAEVVSS
GN
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagagcaagcgagggaaggccaagggtgagaagaagaagaaagatgagaaa
gttctccctgtggccattgacatcactgttaacctccctgatcaatctcttgtcattctc
aaggggatttcaacagacaggatcattgatgtgaggcggctgctatgtgtaaacaccgcg
acgtgtgcgatcacaaactactccctatcgcatgagctacgtgatggtcgcttgaaggat
ggtgctgatattgcaacgttgaagccatgtacactcaccttggtagaagaggagtacgac
gaggagagcgcggtggcgcacatacggcggctactggacatcgtcgcctgcaccacctcc
ttcggcccgccgcccccgccgccgccgccgccctcgcccaaggatgcgcccgccgattcc
gccaaggatcccacctccggctcatccaaggcgtccacgcccgggcgccgcacgggctcc
ccgccgccccctgccgcggggcagaaggatgcggccaccaaggacgctgccgcggccgcc
tcctcggcctccgcggagctggaggccgagatgagcggcgcgtgcccccgcctcggcgcg
ttctacgagttcttctccctcgccaacctcacgccgcccctccactttataaggcgagtg
gctcagcctcggcaggaggagcagccttccgacgatcatctcttctttctcgaggcaaag
ctttgcaatgggaaatttgttgttgttgaagcccggaaaaagggattcttcagtctgggg
aagcagcgcgtcttgtgccataacctagtcgatctgctaaggcatcttagtagagcattt
gacaatgcatatgaagatcttatgaaggcatttttggaacgaaacaagtttggaaatttc
ccttatgggtttcgtgcaaacacatggctcgttcccccaattgctgctcagtctccatca
acatttcctcccctcccttctgaggatgaaacctggggtggcaatggtggcggttgggga
agggatggcaagagtgacatgttgccatgggcagatgagttcttgtatctcacatccatg
ccttgcaaaactcctgaggagagggaaattcgtgacaggagagcattcctacttcacagc
ttatttgtagatgttgccatctttagagctattgcagctgtaaggcatgcaatggagatt
aaggatgtatcagcatcagggaatatagatgaagttttgcattcagagacagtgggaaat
tttagcatcactgtcacgagagattcttcagacgcaagctgtaagttggacactaagata
gatggtagccgagccacaggaatggacttcaagcatcttgcggagaggaacctgttgaaa
ggaataactgcagacgaaaatacagctgcccatgatgtggagagtttgggcattgtcaat
cttagatactgtgggtatgttgcagtcgttaaggttaacaatattgagaaagccaaggtg
aactcttcgattaagccaattgatattacagatcaaccagaagggggggcacatgcattg
aacattaacagtttgaggatgctgctaaatgaagccaattcaactggagagaaaaagatg
ttaaaccttccacaaattcataagcaggaagaactaactgcagcacatacttttgtggag
aacctgttaaaggagagtcttcagaagctcgaagaagaggaaagtggaaaacagccattt
atgaggtgggaacttggtgcctgctgggttcagcatttacaggatcagaaaaattctgac
aaggataaaaagcaaggtggtgagaaggaaaagaaaaaggtggtcgataaagctgcgaag
gaggcaaagattgaagggcttgggaaacctttgaaagctcttaagaactcaaaaaataat
gttgatgccgctgagaagggatcctcattgggagaaaaagctatgtctgatggaacaagt
tctgcagaaagccaaaaaatcaagccatcagctgttgaattgcctcagggtgaatctaat
gcctcagagaatgaaagctttctgaaggatttattatctgattctgcctttacacggttg
aaagattcagaaacagggctccaccagaagtcaccgcctgagttgattgagatggctttg
aagtactatgatgaagttgctcttcctaagctggttgcagattttggttctctggaactt
tcacctgttgatggtaggaccttgacagatttcatgcacaccagaggcctacagatgcgt
tcccttggacgagttgtcaagctttcggagaagctttcacatgtacagtccctctgtgta
catgagatgatagtgagggcattcaagcatatcgttcgctctgcaatcgctgctacttca
gacttgcgacagttagcacttgcaatagcttcagcactgaatttgctgcttggtgttcct
gagcctgaggcctctacaagttcccatgatgtgcgtccgctagtatggaaatggctagtg
gccttcttgaaaaagagatatgaatttgagctcactgagcaacattaccatgatgttagg
aaatacgctctcctgagaggactatgccataaggttggcattgaattggcaccccgagat
tttgttatggattctgctttcccatttcaaaaacaagacattattagcttggtacctgta
cacaagcaagttgcatgctcatctgctgatggaaggcaactactggaatcctctaaaacc
gcccttgacaaggggaaacttgaagatgctgtcaattatgggaccaaggctcttgctaag
ctcataacagtttgtggtccctatcatcgaatgacagctggagcttatagtctgctagct
gttgtattgtatcacactggtgattttaatcaggctactatctatcagcaaaaggcccta
gacatcaatgagagggaacttgggctagatcaccctgacacaatgaagagttatggagat
cttgctgttttctactaccgtctacaacatacagaactggctctaaagtatgtcaagcgt
gcgctatatctactgcatcttacctgcgggccatctcatccaaacacagccgcaacatat
atcaacgtagccatgatggaggaaggcttgggtaacgtgcatgtagcacttagatacttg
cacaaagccttaaagtgcaaccagagattacttgggcctgaccatatccagactgctgcg
agctaccatgccatagccattgctctctcattgatggaagcttattccttgagtgttcag
catgagcaaacaaccttgcaaattcttcgtgcaaaacttgggccagatgacttgcggacc
caggatgctgccgcctggcttgaatactttgaatcaaaagttattgagcaacaggaagct
gcacgcaatggaactcggaaacctgatgcatcaattgctagtaaaggacatctaagtgta
tcggatcttcttgactacataaatcccaatgaagaaaacaaaggaagagattctgaatca
atcaaaaggaggtactcaagcataaaggtcctgtctaatacgattggaggttccaatgta
ccaagtcctgaggtttctccaagagattctgctgctgcaaatgtagacgaagaaaagcaa
atcatagagccatcacaagatgatactgttaacattgttactgaagctgaaattaagcta
aaccttagatctgtagagtacccagcgtcatctgagcaaccagtagagagagctgaggtg
attactgatttaccggaagatgttgttcaggaggaaatagtagaacctgaagatggttgg
cagcctgttcaaaggcctaaatcagctggaggttcagggaaacaaatgaagcatttcaat
cccaccaccagaaagatgtatgaccctgataatcatgcttcacaatatacgtctcaatac
aaggcacggaattcctattcaaataaccgttactacttcttaaagaagaggactgttgta
cctgcaacttacacagaccctcaccagcacgtgaaagtccagacatccagtgccaggttt
gggcgtaagatatacaaggctgtaacttatcggattaagccaggaagtacatccacagag
gcacaagatgcttctgccgaccagatgagtggtaaagcagaatcccagatggcttactca
caagtacacaatactacaatagatcataaagaaaatgagccacatggaactttggtggcg
agtagtggaaatgcaccatcatacaaagatgttgcattagcacgtccaggtaccattgct
aaagctcaaatacaaaaattaagagatgatgtactccagaatcagccatcacttggtcaa
attattgcacaagaaatgaaggattctttggtagatactcaccaagtggaacaaggatct
gtatctgtagatatcaataatcccaatgaagtaagcaacattccagaagaaattcagcat
tcaggagacatgaaagtgtctgacagagaactagacactgggaatattgacaaaggtcga
ttacctaatgatgagaaatccttagatggcagtgaacctgcgaatggtcacacgagtcaa
gaaccggtaagttgtagcaatgaaaatgtcgccattgagttcacggagtcttctaattct
gcaaaagatgaacggaacaggaaaccagatatggtgattttcgaagaaactctacccacc
agcattgaacctattacagtttctgcttctgcagtaaatgcagacgcccatggaggtgct
ggaagtgagaagtcaaagcccaacttgctgctaaatagtattgatttgagagagatgcct
aataaaaaactgtctgctgctgcaccgccatttaatccctctccaccagctatccttagc
cctcttgctgtaagtgtgggtctcccgccacctggtgctatcccaggtgtcgctccttgg
cctgtgaatgtacctatgcaccctggacattcaactatggttccaagtggtcctccgttg
tgcacctcccctcaccacttgtaccctccggctcctcggtcacctaatctcttgcaccca
gtgccatttatttatccaccatacagtcagccgcaggtcattccaagctccacatttccc
atgaacactaatatttttcgtcctaatcattatggatggcaaccctatatgaacgcacct
tcaacagaatttgtgccaggatcagcatggtcgagcagccatccagtcgatttcacccca
actcgacatgttgttgaccctatatcccaatctttagcagatacccacattcaatctgat
gcagctgttgttagtataggaccttcgctggacagcagtgcgatggcagtgaaggaggaa
atggaggctacaatggtaggaagtggcaatttggtaagcaacaaacatcctggagatgat
caagataaacaattaaaagacgcagttagaattgagctgagtcctgatatgccaggagaa
aaggcacatggtattactgcaacagaccattcgaggggcaacatgaagaatgaagatgaa
ggtagctttaggatatatgtgaaggggaaaagccggcggaagcaaactctcagaatccca
ataagcttgcttaataagacatatgggtcacgctctttcaagtttgtctacaacagggta
gtcagagaaaatgacatattcaggccatcgactgcctcctttgctgaagttgtttcatct
ggcaactaa
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