KEGG   Oryza brachyantha (malo sina): 102721342
Entry
102721342         CDS       T02995                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03420  Nucleotide excision repair
obr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    102721342
   03460 Fanconi anemia pathway
    102721342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obr03032]
    102721342
   03400 DNA repair and recombination proteins [BR:obr03400]
    102721342
DNA replication proteins [BR:obr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    102721342
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102721342
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 102721342
NCBI-ProteinID: XP_006649219
UniProt: J3LIY4
LinkDB
Position
3:37914..43098
AA seq 1038 aa
MQTLVVMGRLWRRPTSPLQSVGSAARSTLLVVSPVSLPFFRGEGKDAAAAAMLPFEEQVV
ADLLEDPNGGLVVLSSGLPLASLASALLLQLYHQSPGGCFLILSAPDPLKDQIRRRLLQP
NSQPLLQLHDVAPDLPAHHRVALYASRAALFLSPRALVADLLTHRLLPSHVHALLLLSAH
RSSDTSSDAFVARLLRQHHLLPVYAFSDRPHAMVSGFAKAERTMKSLYIRRLHLWPRFHV
LAAADLERAPPEVVDVRVPMTQPMRGIQAAILDAMDACLKELRRTNKVDVEDLTVDKGLF
KSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKLLDYLLRYDAVTYLKYLDTLRVSEGV
RSVWIFADSSHKIFDLSKRRVYQVVRADGTKVAADSKGTPTKKRKVAHSSSRKGKETENE
DSNDNKDNAQKVHAETGVVVEEILEESPKWKVLRELLQEIAEEQAKGDGDNVTPVHEDRL
NESGIVLIACKDERSCLQLQECMSKGLHQVMRVEWEKYLLGKAELHGLHRKNKKTSQQPK
GFGVLDGEVPMRSGESAGPVSISKLETNALLAAASEISTVTKEANRDDDSNVNCRKRGLV
KGKGKFKKTMAKREANNLRNRNTTEHTNLEVEGQSVKTDEHEIDACKLSAEDDSASAPAV
DKAVNCMSAFGDFVDAKPLPHVQFYALDSDHHVLDVWKPSVIIVYHPDITFVREIEVYKA
ENPSMKLKVYFLFYEDSAEVQKFESSIRRENEAFESLIRQKSLMMIPVDQNGRCIGPTLA
NEPEALLSQNSITRKAGGRKPPEKEMQVIVDMREFMSSLPNVLHQKGIRIIPVTLEVGDY
VLSPLICVERKSIADLFQSFASGRLYNQIETMVRYYKIPVLLIEFSQDKSFSFQSASEIG
DDVSPRNISSKLSLLVLHFPRLRIVWSRSLHATADIFLSLKTNQDEPDESKAMRVGVPSE
DGVVENDVRAENYNTSAIEFLRRLPGVTDSNYRAIMEECNSLAEMALLPLERLSELMGSQ
KGARMLKEFLDAKCPTML
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgcaaactttggtagtaatgggccggctgtggaggaggcccacgagcccactgcagtcg
gtcggtagcgcagcgcgttctactctcctcgtcgtctcccccgtctctctcccattcttc
cgaggagaaggaaaggacgccgccgcggccgcgatgctcccgttcgaggagcaggtggtg
gcagacctcctggaggaccccaacggcggcctggtggtcctctcatccggcctcccgctc
gcctccctcgcctccgctctcctcctccagctctaccaccaatcccccggcggctgcttc
ctgatcctctccgctcccgaccctctcaaggaccaaatccgccgccgcctcctccaaccc
aactcccagcctctccttcagctccacgacgtggcccccgacctccccgcccaccaccgc
gtcgccctctacgcctcccgcgctgcgctcttcctctccccccgcgcccttgtcgccgac
ctcctcacccaccgccttctcccctcccatgtccacgcccttctccttctctccgcccac
cgctcctccgacacctcctccgacgccttcgtggctcgcctcctccgccagcaccacctt
ctccctgtctacgccttctccgatcgcccccacgccatggtctccggcttcgccaaggcg
gagcgcactatgaagagcctctacatccgacgcctccacctctggccccgcttccacgtt
cttgctgcagcagacctcgagcgcgccccacccgaggtcgtcgacgtacgcgtccccatg
acccagcccatgaggggcatccaggcagccatcctcgatgccatggacgcctgcctcaag
gagctgagacggactaacaaggtcgatgtcgaggacctcaccgtcgacaagggcctcttc
aagtcctttgatgagatcgtcaggaggcagctcgaccccatctggcacacgcttggcaag
aagaccaagcagctcgtcgccgacctcaggacgctacgcaagttgcttgattatcttctc
aggtatgacgccgtgacatacttgaagtacctagacacactcagagtatctgaaggcgtc
cgatctgtttggatctttgctgattcaagccacaagatatttgacctttcaaaaaggcgt
gtctaccaggttgtgagagcagacggtacaaaggttgctgcagacagcaagggcacacca
acaaagaagaggaaggtggcacacagtagtagcaggaaaggaaaagaaactgaaaacgag
gattccaatgataacaaggacaatgctcagaaggttcatgcggagacaggcgttgtagtg
gaggagattttagaagaatcgcctaaatggaaggttttacgggaactgttacaggagata
gcagaagaacaggcaaagggagatggtgacaatgtaacacctgttcatgaagacagactt
aatgagagtggcatagttttgatagcatgcaaagatgagcggtcatgcttgcagctgcaa
gaatgtatgtcaaaaggcttgcatcaggtcatgcgggtcgagtgggagaaatacttgctt
ggcaaagctgaacttcatggattacatagaaagaacaagaagacatctcagcaaccaaaa
gggtttggggttctggatggggaagttcctatgaggtctggtgagagtgcaggtcctgtt
agcattagcaagcttgagactaatgccttacttgcggctgcctctgaaataagcactgta
accaaggaagcaaatcgtgatgatgattcaaatgtcaactgtaggaagagaggattggta
aaaggaaaaggtaaatttaagaaaaccatggcaaagagagaagccaataacttgagaaac
agaaatactacggaacatactaatttggaagttgaaggtcaatcagtaaaaacagatgaa
catgagattgatgcctgtaagttgtctgcagaagatgattctgcatcagctccagctgtt
gacaaagctgttaactgtatgtctgcttttggagactttgtggatgccaaaccgctacct
catgtgcaattttatgccctagacagtgatcaccatgtacttgatgtatggaaaccttct
gtaattattgtttatcatccagatataacatttgttagagaaattgaagtatacaaggca
gaaaatccatcgatgaagttgaaagtatactttcttttttatgaagattctgctgaggta
caaaaatttgagtccagcattcgccgggaaaatgaagcattcgagtctttgatcagacag
aagtcgctgatgatgatacctgttgatcagaatggccgttgcattggaccaactcttgca
aatgaaccagaagctcttttatctcaaaattcaataacaagaaaggctggtggtagaaag
ccaccagagaaggagatgcaggttattgtggacatgagagaattcatgagcagtcttcct
aatgtattgcaccagaaagggattcgaataatacctgttaccttggaagtcggtgactat
gttctttctcctttgatctgtgttgaacgaaaaagtattgcggacttgttccaaagcttt
gcttctggtcgtctgtacaatcagattgaaactatggttcggtattacaagatcccggtg
cttctgatagagttctcacaagacaagagcttttcctttcagtctgcaagtgagattggc
gatgatgtatctccgagaaatataagctctaagctttcattactagtcctgcattttcct
cggcttcgcatagtctggtctcgcagcttgcatgccacggcagatatattcctatcactc
aaaacaaatcaggatgaacctgatgagagcaaggcaatgagagttggtgtgccctctgag
gacggggttgtggagaatgacgtgagggctgaaaattacaatacatccgcgattgaattc
ttaaggaggcttcctggtgtgacagattcaaactatagagcaataatggaggaatgcaat
agcttagcagagatggccctgctaccgctagaacggctatctgagttgatgggtagtcag
aaaggggcacgcatgctcaaggagtttcttgatgccaagtgtccgactatgctctag

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