Oryza brachyantha (malo sina): 102721345
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Entry
102721345 CDS
T02995
Name
(RefSeq) vacuolar protein sorting-associated protein 9A isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102721345
Membrane trafficking [BR:
obr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102721345
Protein recycling
Other Rab GTPase associated proteins
102721345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
PorA
Motif
Other DBs
NCBI-GeneID:
102721345
NCBI-ProteinID:
XP_006649789
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All DBs
Position
3:7329507..7334953
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AA seq
477 aa
AA seq
DB search
MEGGGDAFGSATAPLAWHDFLERMRQPSAAEFVKSIKGFIVTFSNRAPDPEHDSVAVQEF
LENMEGAFRAHTPWAGSSEEELESAGEGLEKYVMTKLFNRVFASVPEDVKSDEELFEKMS
LLQQFIRPENLDIKPEYQNETSWLLAQKELQKINMYKAPRDKLACILNCCKVINNLLLNA
SIVSNENPPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRQSRLVSEAQYFFTNILSA
ESFIWNIDAESLSMDERDFQKKMDGARERLLGLSASSENQGDQTNLDVREQKSQTLKASR
DSDVNLSSKDNDQGPGLDMRRDSDVNSNPVERVQSISDLEKKGAAELLKEDDLHKKVQEY
PFLFARSGDLTVADVENLLNSYKQLVLKYVALSQGMGVSPEPPVQSMHDLVVSEEPKNAK
DTVTFNESSEGSSRTGDDIKNDTLHSEVDTMTTQQTSADPSYQKAQQDEASDQPEHT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagggcggcggcgacgccttcgggtccgcgaccgcgccgctagcctggcacgacttc
ctggagcgcatgcgccagccctccgccgccgagttcgtcaagtccatcaagggctttatc
gtaacattctcaaacagagcacctgaccccgaacatgatagtgtggctgttcaagagttc
ctggaaaatatggaaggtgctttcagagctcacaccccctgggctggaagttctgaagag
gaactagaaagtgccggtgagggccttgagaaatatgttatgacaaagctgtttaatcgg
gtttttgcttcggtcccggaagatgtgaagagtgatgaagaactttttgagaagatgtct
ctgctgcagcagtttataaggcctgaaaacttggatattaaaccggaataccagaatgaa
acatcatggctgcttgcacagaaggaactgcagaagataaatatgtataaggctccaagg
gataagcttgcttgcatcctgaactgctgtaaagtcatcaataacctacttctaaatgct
tctattgtatcaaatgaaaatcccccgggagccgacgaattccttcccgtcctcatctat
gtcaccataaaggcgaatcctccacagttgcactcaaatctactatacatacaacgatat
aggcgccaatcacggctggtgtcagaagctcagtatttctttacaaacatcttatccgct
gagtctttcatctggaacattgatgcggaatcattatccatggatgaacgagatttccaa
aagaagatggatggggcgagggaacgcttgttgggactatcagctagctcagaaaatcag
ggtgaccagaccaatcttgatgtacgggagcaaaaatcacaaacactgaaagctagcagg
gattctgatgtcaacctctcttcaaaagataatgatcaaggtcctggtctggacatgaga
agggacagcgatgtgaatagcaacccagttgagcgtgtgcaatcaatttctgatttggag
aagaaaggagcagccgagcttctcaaggaagatgacttgcacaaaaaagttcaagagtac
ccattccttttcgcccgctctggggatctgactgttgcagatgtagaaaaccttttaaac
tcctacaagcagctagtacttaagtatgtagcgctttcacaagggatgggtgtcagccct
gaacctcctgttcagagcatgcatgatcttgtggtgtctgaggagcctaagaatgcgaag
gatacagtaacttttaatgaaagcagtgaaggcagcagcagaactggtgatgacataaaa
aacgatactcttcattcagaagtagacaccatgactactcaacaaacttcggctgaccca
agttatcagaaggcacagcaggatgaagcatcagatcagccagaacatacatga
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