Oryza brachyantha (malo sina): 102721551
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Entry
102721551 CDS
T02995
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102721551
Spliceosome [BR:
obr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102721551
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
RRM_3
P_C10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
102721551
NCBI-ProteinID:
XP_006654460
LinkDB
All DBs
Position
5:complement(14035261..14040844)
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AA seq
444 aa
AA seq
DB search
MAEPSKVIHIRNVGHEIAEADLLQLLQPFGNVAKIVMLRAKNQALLQMQDLHNSVSALQY
YSAVQPSVRGRNVYMQFSSHQELTTDQSSHGRNSDQESEPNRILLVTIHHMMYPITVEVL
HQVFKAYGYVEKIVTFQKSAGFQALIQYQSLQEAVEAFGALHGRNIYDGCCQLDIQYSNL
SELQVHYNNDRSRDFTNPSLPTEQRPRGSQQGYPDPGGLYAFQQPGASYAQMGRAAMIAA
AFGGTLPPGVTGTNERCTLIVSNLNTDKINEDKLFNLFSLYGNIVRIKILRNKPDHALVE
MADGFQAELAVHYLKGSVLFAKKLEVNYSKYPNITSAPDAHDYTTSSLNRFNSNVIKNYR
HCCAPTKMIHISALPQEISEDTILNHVSEHGSVVNTKLFEVNGKRQALIQFESEEEATEA
LVSKHATSLEGNTIRISFSQMQSI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgtccaaggtgatccacatccgtaacgtcgggcacgaaatcgctgaggct
gatctactgcagctattgcagccgttcggcaatgtcgccaagatcgtcatgctgcgtgcc
aagaatcaggcacttctccaaatgcaggacttgcacaattccgtgagtgcgctgcagtac
tacagtgctgttcaacctagtgtaaggggaaggaatgtgtacatgcaattttcatcccac
caagaacttaccactgaccaaagctctcatggacggaattcagatcaggagtcagaaccc
aaccgaatcctcttagttactattcaccacatgatgtatcctataactgtggaggttctg
caccaagttttcaaagcttatggatatgtggagaagattgtcacgtttcagaagtcagct
ggttttcaagcccttatccagtatcaatcactccaagaagctgtggaggcatttggtgct
ttgcatggaaggaacatatatgatggttgctgccagctggatattcaatattcaaatctt
agcgaactgcaagtccactacaacaatgatcgttctagggatttcacaaacccatcattg
cctaccgaacagcgtccaaggggctctcagcaaggctatccagatccaggtggtctttat
gccttccaacaaccaggagcttcatatgcacagatgggaagagctgcaatgatcgcagct
gcatttggtggaactttaccccctggggtaactggtacaaatgaacgttgcacactaata
gtcagtaatttgaacactgataaaataaatgaagacaagcttttcaatctgttctctctg
tatgggaacatagtccgaatcaaaatactgcgcaacaaaccagatcatgcccttgttgaa
atggctgatgggtttcaggctgagctagctgtgcattatctaaaggggtcagtgttattt
gcaaagaagctcgaggttaactactcgaagtaccccaatataacatccgctcctgatgca
catgactacacaacttctagtcttaacaggttcaatagcaatgtaatcaagaactaccga
cattgctgtgctccaacaaaaatgatccacatttcagcccttccacaagagatctctgag
gacacaattctcaaccatgtttctgaacatggttctgttgtaaacacaaagctatttgag
gtaaatggcaagagacaggcactcatccaatttgagagcgaagaggaggcgactgaagcc
cttgtatcaaaacatgccacctcgctggagggtaacacaatcaggatctcattctcccag
atgcagagcatatag
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