KEGG   Oryza brachyantha (malo sina): 102721613
Entry
102721613         CDS       T02995                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obr04131]
    102721613
Membrane trafficking [BR:obr04131]
 Autophagy
  Other autophagy associated proteins
   Others
    102721613
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 Beta-prop_WDR5 BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st CFAP251_N Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_Vps41 CPSF_A Beta-prop_HPS5 Beta-prop_WDR36-Utp21_2nd Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_VPS8 WD40_Gbeta Tricorn_2nd DUF7099 PEP5_VPS11_N Ge1_WD40 Beta-prop_IFT80_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 102721613
NCBI-ProteinID: XP_015692773
UniProt: J3L7J7
LinkDB
Position
1:complement(31748182..31752170)
AA seq 434 aa
MATPPDAAPAPPNPSPADHPPPATDAEQPLPTTSIDPTPSGDEERDADDSSSSSAPPAAA
AAGGGGGGERAPQPPAAKDLLHISFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLAAAG
ESGGGGIGVVEMLFRCNILALVGGGDSPHYPPNKVMIWDDHQSRCIGELSFRSPVRGVRL
RRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRV
EHYGARKTKFINAHTSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADR
AEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTTNDKPLPAPDPDVPHISPSLSFIK
GVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQL
ECYNFLKPSSDQPQ
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcgacgccgcccgacgccgcgccggccccaccaaaccctagccccgccgaccacccg
ccgccggcgacggacgcggagcagcccctccccaccacctcgatcgaccccaccccctct
ggcgacgaggagcgcgacgcggatgactcctcgtcctcgtccgcaccgcccgccgccgcg
gccgccggaggtggtgggggaggcgagagggctccccagccccccgcggcgaaggacctc
ctccacatctccttcaaccaggactacgggtgcttcgcggcggggactaagtcgggcttc
cgcatctacaactgcgacccgttccgcgagatcttccgccgggacctcgcggccgccggg
gagagcggcggcggcgggatcggcgtcgtggagatgctgttccggtgcaacatactggcg
ctcgtcggcggcggcgacagccctcactacccgcccaacaaggtgatgatctgggacgac
caccagagccggtgtattggggagctctccttccgctccccggtgcggggcgtccgcctc
cgccgcgatcgcatcatcgtcgtcctggagaacaaaatcttcgtctacaacttcgcagac
ctgaagcttgttcaccagatcgagacggcgcccaacccgaagggcctctgtgcggtgtcg
cagcagcctgggtcgatcgtgctggtttgccccggtgcgcagaaggggcaggttagggtg
gaacactatggcgccaggaagaccaagttcatcaatgcgcatacttcccgtgtcgcgtgc
tttgcattatcgcaggacgggaggctgattgctactgccagcaccaaggggacactcgtc
agaatctacaatgctgccgagggcaatctcctacaggaagtaaggagaggcgctgataga
gcagaaatatatagcttggcattctccaacaatttgcagtatttggctgtatcaagtgat
aaaggaacaatacatgtattcaatctaaagataaatgttggtttaaccacgaacgataag
cccctgcctgctccagatcctgacgttccacatattagtccatctctttctttcattaag
ggtgtgctaccaaaatatttccattctgagtggtctgtagctcagtttagacttcatgag
ggggagcagtatatcgtagcatttgggcacgagaagaataccgtggcagttgttgggatg
gatggaagcttctacagatgccagttcgacccggtgaacggaggagagatgctgcagctg
gagtgctacaacttcctaaaaccatcatcggatcaaccgcagtag

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