Oryza brachyantha (malo sina): 102721697
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Entry
102721697 CDS
T02995
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00906
Carotenoid biosynthesis
obr01100
Metabolic pathways
obr01110
Biosynthesis of secondary metabolites
Module
obr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
102721697
Enzymes [BR:
obr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
102721697
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GFIT
Motif
Pfam:
NnrU
PEMT
DUF2105
ICMT
Motif
Other DBs
NCBI-GeneID:
102721697
NCBI-ProteinID:
XP_040385362
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Position
12:8022285..8026738
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AA seq
370 aa
AA seq
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MASHLLLRLPAPPPRALVLRLPRLRVPSPPSSAAPSAPLLLGARVILSSASAIQPARARG
SSIGGAGEEDSDGEADGGPPLVGEDSAVFRLGDQRVASWVYFSGILAVVLWGLNVLWIDP
ATGVGTRFLEAVAAVSDSHEVTMLLLTIIFAIVHSGMASLRENGERMVGARAYRVMFAAI
SLPLAVSTVVYFINHRYDGIQLWQVQGISGIHELVWISSFISFFFLYPSTFNLLEVAAVD
KPKFHMWETGIMRITRHPQMVGQVIWCLVHTLWIGNSVAVAASVGLIGHHLFGVWNGDKR
LALRYGEAFEILKNRTSVVPFAAIIDGRQKLPKDYYKEFIRLPYIAITALTLGAYFAHPL
MQASSYKLPW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccaccttctcctccgcctccccgcccctccgccgcgggctctcgtcctgcgg
ctcccgcgcctgcgcgtgccctcgccaccgagcagcgcggccccctcggctccgctgctg
ctcggggcccgcgtcatcctctcctcggcctctgccatccagccggcccgggcgaggggg
tcctcgatcggcggcgctggggaggaggactcggacggcgaggcggacgggggcccgccc
ctcgttggggaggactcggcggtgttccggctgggcgaccagcgggtggcgtcgtgggtc
tacttcagcgggatactcgccgtcgtgctgtgggggctcaacgttctctggatcgacccg
gccaccggggtcgggactaggttcctcgaggcggtcgccgcggtctccgacagccacgag
gtcactatgcttctgcttaccatcatttttgctatcgtccatagcggtatggcaagctta
cgtgaaaatggtgagagaatggtgggggcacgagcttaccgtgtaatgtttgctgcaatc
tcactgcctttagcagttagtactgttgtctattttataaatcatcggtatgatggtatt
cagctatggcaagttcagggtatttcaggcattcatgagcttgtttggatctcatctttc
atctctttcttctttctgtatccatctactttcaatctattagaagtggcagctgtggac
aagccaaagttccacatgtgggaaactggaataatgcgcattaccagacatccacagatg
gttggacaggtaatttggtgcttagtccacacattgtggattggcaactcagtagcagtt
gcagcctccgttggattaattggtcaccatctgtttggcgtttggaatggtgataagagg
ctggcattacgctatggtgaagcctttgaaattctgaaaaacagaacaagtgttgtgcct
tttgctgcaatcattgatggaagacagaaactacccaaagattattacaaggagttcatt
cggttaccatatatcgcaatcactgcattaactttgggagcatactttgcccatccctta
atgcaagcatccagctacaagcttccttggtga
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