Oryza brachyantha (malo sina): 102722007
Help
Entry
102722007 CDS
T02995
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102722007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102722007
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102722007
mRNA degradation factors
5'-3' decay
Lsm complex
102722007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
102722007
NCBI-ProteinID:
XP_040379607
LinkDB
All DBs
Position
4:11459262..11462727
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPDEIFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggccgggcccgacgagatcttcctctccacatccctcgccggcttcctggac
aagaaacttattgtcctactacgagatggacggaagctgcttggcacactctgttcattt
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgtaggggaacta
tattgtgatgttcctcttgggctatatgtgatccggggagagaatgttgtattaattgga
gaattggatcgtgagaaggatgaactccctgctcacatgacttgtgtttcagaggctgaa
ataagaaaggctgagaaagcagaaagggaagcaagagatctgaaaggttcaatgaggaag
aggatggagttcttagactttgattag
DBGET
integrated database retrieval system