Oryza brachyantha (malo sina): 102722016
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Entry
102722016 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102722016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102722016
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102722016
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
HECT type E3
102722016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
102722016
NCBI-ProteinID:
XP_015692461
LinkDB
All DBs
Position
5:1066914..1074713
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AA seq
1339 aa
AA seq
DB search
MAVLQYVVAELSDEGAGAGAHAAALAALCDVLAVASDGLFDVFPIADFVKRLPQLVASGE
GDVPLFAARAIAEACEGVPLWAPSFAKYGAVEALRDKLLAVDCIELAEECLRALNVISTE
RPGDCLRLGVSAAVLQFFDFFSTNKQKLVLKIVANVLKDFEEKDADKAMEAAPGLCALLQ
STDKTMIDSAVSCLVLVSYGASGSAKHMEKLYELNAVEAMMRLMENNGWKSLSDDTLSGI
LGLLKDLASVSARVAKSLFELNICDFLKQMITYYTLSHSDHNKVQMLIELIYYLMPPLER
CDHRTELIIAKKNVIIEESRYVEQVASILTFIIQVAKSAALSSICYSCVVVIRNIVELST
PSSLVEVQKTVNISSLLAVWLARKNRHIIFQTLNISKTLLKKHQKFFFETFIKEGVKHAI
DTILAQEKDAKSNHKQRGKNLQESCLCFDLDLDTSTDDACRIEKGAILKLSEDIKKNFLV
KETAKPHHRFGCDFKSIKELFSRLNGHAEPPPAKEQNLNRSEKDQELCKQLSDFSRQLLS
DELPSTSTFEFVQSGSVKHLAGYLSNGAYFNSNIRNCQDFLGELKEVKNRLQKFTHLALT
VRNQSSVKPLGILVEKLIDALHVCYDSFPVILADEQHTRESTMIPLRDSGTEGPVDLYIK
FSRSSTKEELDNYNSVLPVYLSSTPESIEEVLWPEICRRTGNESAYKEATQEANGSRTPV
GLRNGGGRKSSRLKFSYKGTHLQSSTTFFESILRSMHEGQTDIQIDPSFWDKDHKIVYRR
RNKSKKISSQSSYNTQLSRVHEKLGISLIKDPFFSTIFTGKLPGDLDESDPSYNFLFMLK
VLEGLNRFSYHLSMDERLCKFSEGYLQALDDLMVTISPIPRDQFVSSLLTNKLEQQMQDS
LFGDGLIPSWCIHLVETCPFLLSFEARWKYFCLTAHCSFMTDKNGSSTETKKYRVIRSKI
LECAASMFNKHGSDTKFIEVEFGGEAGTGRGPTFEFYTTVSHELQKMGLGMWRGDITSQE
NKAGFVHAPFGLFPQPWSSANTSSRGISLSDVVQKFKLLGHLVARSVLDGRVLDIPLSKA
FYKLMLEHELDIYDIPSFDPELGKTVIEFQALVKRKKFLEERTSNLAADLSYKNVRFEDL
CLDFTLPGNPEYELVPGGSEKMVTPDNLEEYVSSVADATLKSGISNQIEAFKAGINEVFA
LKTLQLFSEDEMERILCGEQDSWASNKLEDHICFDHGYDANSPPIISFLEILREFGREDQ
RAFMHFTTGSPQLPLGGLASLDPKLTIVRKQCDGKVDDELPSVNTCRHFFKLPPYSSKEI
MRQKLKYAIKEGLGSFQLS
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgcagtacgtggtggcggagctgagcgacgagggcgcgggcgccggggcg
cacgcggccgccctcgcggcgctctgcgacgtgctggccgtcgccagcgacggcctcttc
gacgtgttcccgatcgccgacttcgtcaagcgcctcccgcagctcgtcgcctccggggag
ggagacgtgccgctcttcgccgcgcgcgccatcgccgaggcctgcgagggggtgccgctc
tgggcccccagcttcgccaagtacggcgccgtcgaggcgctccgcgacaagctgctcgcc
gtcgactgcattgagctcgccgaagagtgcctgcgagctctgaatgtcatctccacggag
cgcccaggcgattgcctccgtctcggtgtgtcagccgccgtgctgcagttcttcgacttc
ttctcgacgaacaagcaaaaactggtgctcaagatcgtcgctaacgtcctcaaggacttc
gaagagaaggatgcggacaaagccatggaggccgcgcccgggctgtgtgccctcctgcaa
tccaccgacaagacgatgatcgactccgccgtttcatgcttggttttggtctcttatggt
gcttccggcagtgccaaacatatggaaaagctttatgagcttaatgcagttgaggcaatg
atgaggttgatggagaacaacgggtggaagagcctcagtgatgacactttatctggcatc
cttgggctgctcaaagacctagcttctgtctcagcaagggttgcgaagtctctatttgag
ttaaatatctgtgattttctaaagcagatgataacatactacaccttgtcgcacagtgat
cacaataaggtgcagatgcttattgagctcatttattatcttatgccacctcttgaaagg
tgtgaccatcgcactgaattaataattgcaaagaagaacgtcatcatagaagaaagcaga
tatgtcgaacaggttgctagcatccttacctttataatacaggttgcaaaatctgctgca
ctatcatcaatttgctacagctgtgttgttgtcattagaaacattgttgagttaagcaca
ccttcctctttggtggaggtacagaagactgtaaacatatcaagcttacttgccgtctgg
ctggcccggaaaaaccgtcatatcatattccaaacgctcaacatttcaaagacccttctg
aaaaaacaccagaaattcttctttgagaccttcatcaaggagggtgtaaagcatgcaatt
gataccatactagcacaagaaaaagatgcaaaatcaaatcataagcaaagaggaaagaac
ctgcaagaaagttgcctttgctttgatctagacttggatacctcaacagatgatgcatgc
aggattgagaaaggcgctatcctcaaactatcggaggatataaagaaaaacttcttggta
aaggaaactgccaagcctcatcataggtttgggtgtgattttaaaagtataaaggaatta
ttttctcgattgaacggacatgccgagccacccccagctaaagaacagaatctcaacagg
tcagaaaaagatcaggaactctgcaagcagttgtctgatttttcaaggcaattattatca
gatgaactgccaagtacttctacttttgagtttgttcagagtggatcggtcaaacacttg
gcaggttatctttcgaatggggcatacttcaattcaaatatcaggaattgccaggacttt
ttaggggagcttaaggaggtgaaaaaccggctgcagaagttcacccatttggctcttaca
gtgaggaatcaaagctcggtgaagccacttgggattttggttgagaaactgatagatgcg
ctgcatgtgtgctatgacagttttcctgtaatactagctgatgaacagcatacacgtgag
agcactatgattcctctgagggactcaggaaccgagggaccagttgatctgtatataaaa
ttttcaaggtcatccacgaaggaggagttggacaattataatagtgttctccctgtttat
ctttcttcaacacctgaatccattgaagaggtcctctggcctgagatttgtagaagaact
ggcaatgaatctgcatacaaggaagccactcaagaagcaaatgggagcagaacaccagtt
gggctcagaaatggtggtgggcgaaagtcctcaaggttgaagttctcttacaaaggaaca
catctccagtcatctacaacattttttgagtcaatcctccgttcaatgcatgaaggacaa
actgatatccagattgacccatctttctgggataaagatcacaaaatagtatacagaaga
agaaacaaaagcaaaaaaatatcttcgcagagttcctataatacccagttgtcccgtgtg
catgaaaaacttggaatatcattgataaaggacccgtttttctctaccatattcactggc
aagcttcctggcgatctggatgaatctgatccatcatataacttcctgttcatgctgaaa
gtccttgaagggctcaaccgtttctcatatcatctgtcaatggatgagaggttatgcaaa
ttttctgaaggctacctccaagcgttggatgaccttatggtgacaatttctccaattcca
cgggatcagttcgtgagcagtcttctgacaaataagctagagcagcaaatgcaagatagc
ttgtttggggatggcttgataccctcgtggtgtatacacttggttgaaacttgcccgttc
ttattgtcattcgaagctcgatggaagtacttctgcctaactgcacattgctcgttcatg
acagacaagaatggcagttcaacagaaactaagaaatacagggtaatacggagcaaaatc
cttgaatgtgctgcatccatgtttaacaaacatgggtcagacaccaaattcattgaggtg
gaatttggtggagaggctgggaccggtcgaggcccaaccttcgaattctatactacagtt
agtcatgaactacagaaaatgggtcttggaatgtggaggggagacatcacgagccaagaa
aacaaagctggttttgtccatgccccttttggtctctttccacaaccatggtcctcagca
aacacttcatctcgagggatcagtttgtctgatgttgtacaaaaattcaagcttctcggg
catcttgtagcaagatcagttttggatggaagggtcctggacattcctctctcgaaagca
ttttacaagctcatgcttgaacacgagcttgatatttatgacatcccatcatttgatccc
gagctgggcaagactgttatagagtttcaagcacttgttaaaaggaagaagttcttggag
gaaaggacatccaacctggcagctgatttgtcctataaaaacgtgagatttgaggattta
tgtcttgactttacccttcctggaaacccggagtatgaacttgtccctggaggctcagag
aagatggtgacacctgacaatttggaggagtatgtgtcttcagttgctgatgcaaccttg
aaaagcgggatttccaatcaaatagaagctttcaaggctggaattaacgaggtttttgct
cttaagacccttcaattgttcagtgaagatgagatggagcggatactatgcggcgaacaa
gattcttgggcttcaaacaaacttgaggatcacatctgttttgatcacgggtatgatgca
aatagtccaccaataattagtttcctggagatcttgcgtgagtttggaagagaggaccaa
cgggcattcatgcattttacaactggatctcctcagctcccacttggtggcctagcttcg
cttgatcctaagctcaccattgtccgaaagcaatgtgatggcaaagtagacgacgaatta
ccaagtgttaatacttgccggcatttcttcaagcttccaccgtactcctccaaggagatc
atgagacagaagctcaaatatgctatcaaggagggtttaggctcattccaattgtcatga
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integrated database retrieval system
