Oryza brachyantha (malo sina): 102722038
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Entry
102722038 CDS
T02995
Name
(RefSeq) ribonuclease E/G-like protein, chloroplastic isoform X1
Organism
obr
Oryza brachyantha (malo sina)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
CBM_20
RNase_E_G_Thio
Motif
Other DBs
NCBI-GeneID:
102722038
NCBI-ProteinID:
XP_006659300
UniProt:
J3MS51
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Position
8:complement(8461592..8472829)
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AA seq
1078 aa
AA seq
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MSASAMGASPPLGATLAPRCTAAAVDASEPPHGCRRSAAALGSALSGHRGRHTLCSVQLM
DALRGGNLLVEPNMVHSPKPLMSTRHDDSAITCKGFCTISWNLKADVLDGYIIFVTGDPV
TLGCWESDMAVQLAPSVESSNLWMAEIKVPYGVHFKYNYFVRKENDSSSDIIWRPGPAYS
LSIPSVGWKEHVIVVKDLWMKTNVAGIPSPSWGSWLMEASFLEDQFAENGEHQSIAEAHS
VIDTVDQFSSVGEHIILRLGNGTPLHVKNISHNPSASVHDDFTVTDKTNSKSSINQHERN
QPVEEPWILGSVVSAKKSVAAVKHEKNRWKFVNKKQDLIEVSENISEQDQPVEEPWLFQS
KVVAKNPVVQTKGKIEAKDIIRKLRKMDKPPSPLEESKTTSGEPSSRVILINSSVCTMQR
IAVLEDGKLVELLLEPIKNNVQCDSIYLGIVTKLVPHMGGAFVDIGLSRPSLMSIKQNRD
PFVYPQIMKDAKRDSANFSDYNDDSLPTYEEDDDMSDGELADEENEDDSSAFPVEVVSEN
EESMAFLPNSKINMIHSSEFESLSSYDEEKDDEIDDNMEDEYSEDVLPGDQSEVSNDLKT
LSSIQHALRDSSDDTNGSRWSQVRKGTKIMVQVVKEGLGSKGPTLSPFPCLRSRFWILVS
RGNKVGVSKKITGIERTRLKGITKLLRPPGFTLTARTVASGHSWEELQKDLERLLSTWKG
IIEHAQSAALAAEEGVEGAVPVILHRSKGQALSVVQDDFNEKVKRLVVDSPRTYHEVTSY
LQEVAPELCNRVDLYEKRTPIFDEYKIEKEIDNILCKRVPLHNGGSLVIEQTEALVSIDV
NGGHSMFGQGTSQERAILEVNLEAAKQIARELRLRDIGGIIVVDFIDMTDDTNKRLVFEE
MKKAVEKDRSTVGVSELSKLGLMEITRKRVRPSVTFMISEPCPCCHGIGRVEALDTSFSK
IEREICRRLAASGHKSDPEKPKSWPRFVLRVDHEMCTYLTSGKKTKLGLLSSSLKVWILL
KIARGFARGAFELLPYSDEKESDEQKEETPEPPPKEAGSPKLSVFPIKKWMSRAKRAK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagcgcgatgggggcatctccccctctcggtgccacgcttgctccccggtgc
accgccgccgccgtggacgcctctgagccgccccatggctgccgccgtagcgccgcggcc
ctcggctcagcgctctccggccaccggggaaggcatactttatgttcagtacaattgatg
gatgctcttagaggcggtaatcttctagtggaaccaaacatggttcattccccgaagcca
ttgatgtccactagacacgatgactcagccataacctgtaaaggattctgtacaatatca
tggaaccttaaagcagatgtgctggatggttacataatcttcgtcacaggagatccagtt
acattgggctgttgggaatcagatatggctgttcagttggctccttctgttgaaagtagc
aatttatggatggctgaaataaaggtaccatatggggtgcatttcaagtataattatttt
gttcgaaaggagaatgactcctcttctgatatcatatggaggccaggtcctgcatactcc
ttgtcaataccctccgttggctggaaagaacatgttattgttgtgaaagatctgtggatg
aaaaccaatgtggcaggtattccctctccttcctggggatcatggctgatggaagctagt
tttcttgaagatcaatttgctgagaatggagagcatcaaagcattgcggaagcccactct
gtcattgatacggtggatcaattttcatcagtaggtgagcatattattctgagactaggg
aatggcacacctttacatgtcaagaatatatcgcataatccatctgccagtgtccatgat
gattttactgtaactgataaaacaaattcaaagtcaagtattaatcaacatgaaaggaat
cagcctgttgaggaaccatggatccttgggtctgttgtgtcagcaaagaaatctgttgca
gcagtgaagcacgagaaaaacagatggaagtttgtgaataagaagcaggacttgattgaa
gtaagtgaaaacatatctgaacaggatcaacctgtagaggagccatggctatttcaatcc
aaggtggtagcaaaaaatcctgtagttcaaactaaaggcaaaatagaagcaaaagatatt
atcagaaagctaaggaaaatggataaacctccatcacctttggaggagagtaagacaact
agtggtgagccttcatcaagagtcatactaattaattcatcagtctgtaccatgcagagg
attgcagtattggaagatggaaaacttgttgaactcttgctggagcccatcaagaacaat
gtacagtgtgatagtatttatttaggcatagtaacaaaacttgttcctcatatgggaggt
gcatttgtggatattggactttcgaggccttcactcatgagtataaaacaaaaccgtgat
ccatttgtatatcctcaaattatgaaggatgctaaaagagattcggcaaatttttctgat
tataatgatgacagccttccaacatatgaagaagatgatgatatgagtgatggggagttg
gctgatgaagaaaatgaggatgattcatcagcatttccagttgaggtagtttctgaaaat
gaagaaagcatggcctttttgcccaattctaagataaacatgattcacagttctgaattt
gaaagtctgtctagttacgatgaagaaaaggatgatgaaattgatgataacatggaagat
gaatatagtgaggatgttctgcctggagatcagtcagaagtatcaaatgatctcaagaca
ttatcttccattcaacatgctttgagagattccagtgatgacacaaacggaagtaggtgg
tctcaagttcggaagggtacaaaaattatggttcaagttgtcaaggagggattgggttcg
aaaggtccaacactaagcccctttccatgcttaagaagccgattttggatactggtttcc
cgtggtaacaaagttggagtatcaaaaaaaattactgggatagagcgcacccggttaaag
ggcattacaaaattattacgacctcctggatttactctgacagctcgtacagttgcttct
ggccattcgtgggaagagttacagaaggaccttgaacgtttgctatctacctggaaagga
ataattgagcatgctcaatctgctgctttagctgctgaggaaggtgtagaaggtgctgtt
cctgtaatattgcatagatccaagggtcaggctctatcagttgttcaagatgatttcaat
gagaaggtcaagaggctagttgtggattctcctcgcacctaccatgaggtcacaagctat
ctccaagaagttgcacctgaactctgcaatcgagttgatctttacgaaaagagaactccc
atatttgatgaatataaaatagaaaaggaaatcgacaatatcctttgcaaaagggttcca
cttcataatggcggttctttagttatagaacagactgaagctctggtttcaattgatgta
aatggtggtcatagtatgtttggtcaggggacatcccaggagagggctattctagaagta
aatcttgaagctgcaaaacaaattgctcgtgaattgcgcttgagggatattggcggcatt
attgttgtggattttattgatatgactgatgacacaaacaaaagattagtctttgaagaa
atgaagaaagcagtagaaaaggaccgatcgacagttggtgtttcagaactgtcaaagctg
ggtttgatggaaataaccagaaaaagggttcgaccaagtgttactttcatgataagtgag
ccctgtccttgttgccatggtattggccgtgtagaagctcttgatacatctttttcgaag
atagaacgtgaaatctgtcgacgccttgctgcctctgggcataaatcagaccctgagaaa
ccaaaatcatggcccagatttgttcttagggtggaccatgagatgtgcacatacttaacc
tcaggcaagaaaacaaaactagggctccttagtagctctctcaaagtgtggattttgttg
aagatcgctagaggttttgctcgtggggcatttgaattgctaccatattctgatgaaaag
gaatctgatgagcagaaggaagagacacctgaaccgcctccgaaggaagcaggcagtcca
aaactgtctgtatttcctataaagaagtggatgagccgtgcaaagagagcgaagtga
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