KEGG   Oryza brachyantha (malo sina): 102722075
Entry
102722075         CDS       T02995                                 
Name
(RefSeq) protein SPA1-RELATED 4
  KO
K26557  protein SPA1-related 3/4
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:obr00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    102722075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:obr04121]
    102722075
Ubiquitin system [BR:obr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    102722075
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_TEP1_C Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st WD40_RFWD3 Pkinase Beta-prop_WDR75_1st WDR54 PK_Tyr_Ser-Thr Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 102722075
NCBI-ProteinID: XP_006646280
LinkDB
Position
1:22841350..22846548
AA seq 788 aa
MEGSRVDAVAGGRRWGKGEEGGGGGGGGGGRRGGEDGGEVSLREWLDRPGRAVEAPECLH
VFRQVAESVAIAHAQGVAVGSARPSCFVVSPPFARVAFIESASGSDASGSCSGSDGSEEG
DPDTSPPRRRRDGAGRGEDRGGKTFPLRSVLAMELSWYTSPEEADDSGGATFASDVYRLG
VLLFELFCTFETMEEKRRAMANLRHRVLPPQLLLKWPKEASFCQLLMHPVPDTRPKMGEV
LQSEFLNRSRNSLEEREAALRLREEIEEQELLLDFLLQLQRRKQDIADNLQDTVAFLSAD
INEAMHQQSALGQCGTFSFELDKEVCSETVEDQSDCGSRKRFRPELPAVDMEEQNRSLEE
CSGTVPSSVLIQETVLSKSSRLMKNFKKLETAYFLTRSKVAKQVGNPVSSCHQVVRRTTG
SPVVTEGSSIDDFALEGHYGTRQRGWMNSFLEGLCSYLSFSKLKVKAELKQCDLLNSSNL
VCSVGFDRDKEFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSKLSCICWNSYMK
SHIASSDFEGIVQVWDVTRSQVFVEMREHERRVWSVDFSLADPTKLVSGSDDGSVKLWNM
NQAGSVGTIRTRANVCSVQFQPDSARSIAIGSADHKIYCYDLRNIRAPYCTLLGHTKTVS
YVKYVDASTIVSASTDNSLKLWDLSMSQARIIDSPLQTFTGHTNTKNFVGLSISDGYIAT
GSETNEVFVYHKAFPMPVLAYKFSVTDPISGQEIDDPSQFISCVCWRGQSSTLLSANSSG
NIKILEMD
NT seq 2367 nt   +upstreamnt  +downstreamnt
atggaggggtcccgtgtggacgccgtggcaggcgggcggcggtgggggaaaggggaggag
ggtggaggaggaggaggtggtggcggagggaggagaggaggggaggacgggggtgaggtg
agcctgcgggagtggctggaccggcccggccgggcggtggaagctccagagtgcctgcac
gtgttccgccaggtggcggagtcggtggccatcgcgcacgcgcagggggtggccgtaggc
agcgcgcgtccctcgtgcttcgtcgtgtcgccgcccttcgcccgcgtcgcgttcatcgag
tccgcctccggctcggacgcctctggctcctgctccggctccgatggctcggaggagggc
gacccggacacctcgcctccgcggcgacgacgagacggcgccggccgaggggaagaccgc
gggggcaagacgttcccgctgaggagcgtgctggcgatggagctcagctggtacaccagc
cccgaggaggccgacgacagcggcggtgctaccttcgcctccgacgtgtacaggttgggg
gtgcttttgttcgagctgttttgtacgttcgagacgatggaggagaagaggcgagcaatg
gcgaacctacggcaccgtgtcctacctccacagttactgctcaagtggcccaaggaagca
tccttctgtcagttgctgatgcaccctgtgccggacacccgaccgaagatgggtgaggtg
ctacaaagtgagttccttaataggtcaagaaatagtctggaggagcgtgaagcagcactt
cgattacgtgaagagatagaagaacaagaattactgctggattttcttctgcaactacag
agaagaaagcaagatattgcagacaatttgcaggataccgttgcatttctctctgctgac
atcaatgaagcaatgcaccagcagtcagctctggggcaatgtggaaccttctcatttgag
ttggataaagaggtgtgctctgaaactgttgaagatcagagcgattgtggatccagaaag
cgtttccgaccagagttaccagctgtagatatggaggaacagaatcgtagtctcgaagaa
tgttcaggaacagttccatcatctgtgctaatccaggaaactgtgttgtctaaaagctct
aggctaatgaagaacttcaaaaaacttgaaacagcatattttctgacaagatccaaggtg
gcaaagcaagttgggaatccagtaagtagttgtcatcaagttgtgcgaaggactactggg
tcgcctgttgtgactgagggaagttcaatagatgattttgctttggaagggcattatggt
acaaggcaaagaggttggatgaactcttttcttgagggattgtgtagttacttatcattc
agtaagttgaaagtgaaggcagaactgaagcagtgcgatctgctgaactcatcaaactta
gtgtgctctgtaggcttcgaccgggataaagagttctttgcaactgccggtgtaaataag
aagataaaagtgtttgaatataatatgattgtaaatgaacatcgtgatattcactatcct
gtagttgagatgtctaatagatcaaaattaagttgtatttgctggaacagctacatgaag
agccatatagcatctagtgactttgaaggtatcgtacaggtttgggatgttaccaggagc
caagttttcgttgaaatgagggaacatgagaggcgtgtgtggtcggtggacttctcgctt
gcggacccaacaaaattggttagcgggagtgatgatggttcagtgaagctgtggaatatg
aatcaggctgggagtgttgggactatcagaacaagagcaaatgtatgctctgtgcaattt
caacctgattctgctcgctccattgccatcggctcagcagatcacaaaatttactgctat
gatcttcgaaatatacgagctccttattgtacattacttggccacacaaaaacagttagc
tatgttaagtatgtggatgcatcaactatagtatccgcatctactgacaactcattgaag
ctctgggacttgtccatgagccaggcaaggataattgacagtccgcttcagacatttaca
ggtcatacgaacacaaagaatttcgttggactttctatatctgatggttacattgctact
ggctcagagacaaatgaggtttttgtctaccataaagcatttccgatgccagtcttggca
tataaattcagtgtcacagaccctatatcaggccaggagattgacgatccttcacagttc
atttcatgcgtgtgttggagagggcagtcttcaacgcttctttctgctaactccagcggg
aacattaaaatcttagaaatggactga

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