KEGG   Oryza brachyantha (malo sina): 102722465
Entry
102722465         CDS       T02995                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03030  DNA replication
obr03410  Base excision repair
obr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102722465
   03410 Base excision repair
    102722465
   03420 Nucleotide excision repair
    102722465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obr03032]
    102722465
   03400 DNA repair and recombination proteins [BR:obr03400]
    102722465
Enzymes [BR:obr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     102722465
DNA replication proteins [BR:obr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    102722465
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      102722465
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 102722465
NCBI-ProteinID: XP_015688609
LinkDB
Position
2:13764936..13786026
AA seq 2218 aa
MGGGDGRRRKPSAGGGGGGGGGGARGGGWRSGSSAAKEQRLRLGAEELLESRLGFAPYTD
GERRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFPPYFYASTKDKMEL
EVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRNDLLHVV
EKNEEDLNAAEAFESIYGVKRVERPQDYINCIIDLREYDVPYHVRFAIDKDVRCGQWYDV
SVSSSDVLLHRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDTVMMISYMIDGQGYLII
NRECVGEDIEDLEYTPKPEFEGQFRVKNVANELDLLKAWFSHMQEVKPGIYVTYNGDFFD
WPFLEKRAAHHGIKMNEEIGFQCDNNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAV
TKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPM
SPDEVLRKGSGTLCEMLLMVQAFKANIICPNKHQADMEKFFNNRLLESETYIGGHVECLE
TGVFRSDLPTKFQLEPAAYEQLIVNLDRDLQYAISVEGKLDIDSVTNYDEVKDAIKQKLV
SLRDHPTREERPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRNLE
WVWRGETYMAKRSDYHHIKRQIESELIQAGGVTPSKPFLDLSKPEHLLKLKDRLKKYCQK
AYKRVVDKPITEVRNAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLVEAKANGNS
IKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARL
LVDKIGRPLELDTDGIWCVLPGSFPENFTFKTNAGKKFTISYPCVMLNVDVARNNTNDQY
QTLNDPVNKLYTTHSECSIEFEVDGPYKAMILPASKEEGVLLKKRYAVFNEDGTLAELKG
FEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYTAVASVANRWLDLLDNQGIDISDNELL
DFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPVS
ERAIPVAIFETDAEIAKFYLRKWCKISSEASIRSIVDWSYYKQRLSSAIQKIITIPAAMQ
KISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDMFNPLEKDKGMRTLDGTGDMEDLLMLE
SSLRKTHVPNGLGKENKPNGAPSAEAGSDNNKNHQKSITRSNEPLALHIQNDASDEQVDR
STDYQGWLDAKKRKWKYVREQKKRQRLGAAATFDGPTKDLSSARNVSQLHVNARNRSTFF
QKQELALFRSHWQIIQLAPSTLPGRFFAWVVAEGIMFKIPINVPRVFFLNSKAPVTEEFP
GRRVKKILPHGRPCFNLIEVVTSEEQFRVEGKKLAAHLAEPDVEGIYETKIPAELNAILQ
IGCVCKVDKSAKRRNIQDGWDLAELQMKTTAECSYLEQTVSFFYLYHSLSEGRAVYVMYF
PTSFRIHAVVVNPFLNKELSSSFLEKQYRDACQALGSLHDNITFHVDYHTSLDAGSKHVQ
RMLFEYRQQHPGPVIGVLECPKLQAIKAAVRALDDFPCVTIPSNARDNNYQALGWQATAG
RTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSRALRDQQQVLWISDD
GIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVAVELKIHHLAVNSLLKCSQVDELEGGP
VGSFANDTSTGPNGTETEFDDASLCIPAFQVLKQLIQRCISDAVSSGNVFADAILQHLYR
WLCSPRSKLHDPALHRLLHNVMKKVFALMLAEFRKLGANVIFANFSKIIIDTGKVELPSA
RAYCDSLLKTLQTRDIFEWVELEPLHYWHSLLFMDQYNYGGIQAKMQNETSEDGADGDND
IDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVALRSTTRDDTSCTPSITILA
AENLEVQVIGYLRNQISNYFADKLLRIVSDILHHFKGKGKSESVEHANQEPDPHTHKGDA
ALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFSPEAQFQDPCASFTLPNVICSY
CNDCRDLDLCRDSTLQGQEWRCAVPQCGQPYHREQMENALLQVVRQRERLYHLQDLVCLR
CRQVKAAHLSEQCSCGGAFRCKEESSQYLSKMQVFLNVAVSQKFQLLQDCVQWILEVR
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgggcggcggcgatggtcggcggcggaagccgtcggccggaggaggaggaggaggagga
gggggaggggcaaggggaggcggttggaggtctgggtcgtcggcggcgaaggagcagcgg
ctgaggctcggggcagaggagctcctggagagcaggcttggcttcgcgccctacaccgac
ggcgagcgccggcttggatggctcctgacattctccccttcatcatgggaggatgaggac
actgggaaaatatacagctgtgttgacctatacttcgtgtcccaggacggttctacattt
aaagtgaaatacaaattccccccttacttttatgcctcgactaaggataagatggagtta
gaagttgaagcatacctcaggcgacgttatgaaggcgacattgctgacatagaaattatt
gagaaagaagatcttgatctaaaaaaccacctttctggtttgaagaggaaatatttgaag
atccagtttgatacagtacaacaattaatgcgtgtaagaaatgacctattgcatgttgtc
gaaaagaatgaagaagacctaaatgctgcagaggcatttgaatcaatttacggtgtaaaa
agagtagaaaggccacaagattacataaattgcatcattgatctgcgtgaatatgatgtt
ccctaccatgttcggtttgctatcgataaagatgtgcggtgtggacagtggtatgatgtt
agtgtatctagctctgatgttttgttacacagaagggaagatctactacaacgtgcagaa
gttcatgtatgtgcatttgatattgagaccacgaagctacctctgaagtttccagatgct
gaatatgacactgtaatgatgatttcttacatgatcgatgggcaaggatacctgataata
aaccgagagtgtgtaggggaagatattgaagacttggagtatacacctaaaccagaattt
gaggggcagtttagagttaagaatgttgcaaacgagttggatctactcaaagcttggttt
tctcacatgcaagaggttaagcctggtatttatgttacatacaatggtgacttttttgac
tggccatttttagagaagagagctgctcaccatggaattaaaatgaatgaggagattgga
ttccaatgtgacaataatcaaggggaatgtcgagctaaattttcttgccaccttgactgt
tttgcttgggtgaagcgagacagttaccttccacaaggaagtcatggtctaaaggctgta
acaaaagccaagttaggttatgatcctctggaggttaatccagaagatatggttcgcttt
gcaatggagcagcctcagacaatggcttcttactctgtatcagatgctgttgcaacgtac
tatctatacatgacttatgtccatccgtttatcttttcccttgcaaccattatacccatg
tcaccagatgaggttttacggaaaggaagtgggacattgtgtgaaatgctgctaatggtc
caggcattcaaagctaatatcatttgtcctaacaagcaccaagctgatatggaaaaattc
ttcaataaccgtctattggaaagtgaaacttacattggtggtcatgttgagtgtcttgaa
actggtgtatttagatctgatcttcctacaaagttccaacttgagccggcagcatatgag
caactgattgtcaatcttgatcgtgatctgcaatatgccatttctgtcgaaggaaagtta
gatattgattctgtaacaaactatgatgaagtcaaggatgccattaaacaaaagcttgtt
tccttgcgagatcaccctactcgtgaagaacgccctcttatatatcatctggatgttgct
gcgatgtatccaaatatcattttgacaaatagactccagccaccatccatagttacggat
gtggactgcacagcatgtgatttcaatcgtcctggaaagaattgccttaggaatcttgaa
tgggtatggcgaggagagacctacatggcaaaaaggagtgactaccatcatataaagagg
caaattgagtcagagctgattcaagctggtggggtgacaccttcaaagccttttcttgac
ctctcaaaaccagaacatttactaaaattgaaggatcgtctgaagaagtactgccaaaag
gcatataaaagagtggttgacaaaccaattacagaagtgaggaacgctggaatatgcatg
cgtgaaaattctttttatgtagacacagtacgaagctttcgagatagaaggtatgaatac
aaaggtcttaacaaaacatggaaaggaaaattggtggaagcaaaagccaatggaaattct
atcaaaattcaggaagcacaggacatggttgtgctatatgattctttgcaactagcccac
aagtgtatattgaattcgttttatggatatgttatgcgcaagggtgcaagatggtactct
atggaaatggctggtgttgtgacatatactggtgcaaagattatccaaaatgcccgtcta
cttgtagacaaaattggaaggccactggaattggatactgatgggatttggtgtgttctt
cctggttcttttccagaaaactttaccttcaagacaaatgctgggaagaagttcacaata
tcctatccctgcgtgatgcttaatgttgatgttgcgagaaacaacacaaatgatcaatat
caaacattgaatgacccagtaaataaactatatacaacacacagtgaatgctccattgaa
tttgaggtagacggaccttacaaggccatgattctacctgcctctaaagaggaaggggtt
cttctaaagaaaaggtatgctgtctttaatgaagatggcaccttggcagaacttaagggt
tttgaaatcaagcgtagaggtgagctgaagctcatcaaagtttttcaggcagaagtattt
gacaaatttcttcatggttcaactttagaggaatgctatacagctgttgcttctgtcgct
aatcgttggttagacctactggataatcaagggattgatatttctgacaatgagttgctt
gatttcatatctgagtccagcacaatgagtaaatcgctagttgactacggagaacaaaaa
tcatgtgctgtaactacagcaaaaagactagctgaattccttggtgattcaatggtaaaa
gacaaaggactgcattgccaatacatagttgcccgagaaccacagggcactccagtgagt
gagcgtgctattccagtagctatctttgagacggatgctgaaattgcaaagttttattta
agaaaatggtgcaaaatctcctctgaagcaagcatccgatctattgttgactggtcttat
tataagcaacgcctaagctccgctattcagaagattataacaattcctgcagcaatgcaa
aagatttcgaatcctgttcctcgagttcttcatcctgattggttgcacaaaaaggtcaga
gagaaagatgatcgatttcgccagcgcaaactgcgcgatatgttcaatcctttggaaaag
gacaaggggatgcggactttggatggaacaggagatatggaagatttattaatgctagaa
agcagtctgagaaaaactcatgtacccaatggtttaggaaaagaaaataaaccaaatggc
gcaccgtcagcagaagctggttcagataataacaagaatcatcaaaaatctataactagg
tcaaatgaaccccttgctttacatattcaaaatgatgcttctgatgaacaagttgataga
agtaccgattatcaaggatggcttgatgctaagaagaggaaatggaaatatgttcgcgaa
caaaaaaagcgtcaaaggttgggtgctgcagccacttttgatggccctaccaaagatttg
tcttctgcaaggaatgttagtcagttacatgtcaatgctaggaaccggtctacatttttc
cagaaacaagaattggccctctttagatcacattggcagataatacagcttgctccaagt
acattacctggccgtttttttgcatgggttgttgctgaggggatcatgttcaagattcct
atcaatgtgcctagagtctttttcctaaactcgaaagctcctgtcacagaagagtttcca
gggaggcgtgtgaagaagattcttccacatggaaggccatgtttcaatctcattgaggtt
gtaactagtgaagaacagttcagggtggagggcaaaaagcttgctgcccatctagcagag
ccagatgttgagggaatatatgagacaaaaattccagcagagctcaatgccattctccaa
attggttgtgtatgtaaagtggataagtctgcaaaaagacgaaatatccaagatggatgg
gatcttgctgaattgcaaatgaagacaactgcagagtgttcatacctggaacagacagtt
tcatttttctatctataccacagcctgtcagaaggaagggctgtatatgtcatgtatttc
cccacatctttcagaatacatgcagtggttgtcaatcctttcctcaataaagagctatca
tcatcatttcttgaaaagcagtatcgagatgcttgccaagctcttggttctttgcatgac
aacatcactttccatgtggattaccacacatcacttgatgcaggtagcaagcatgtgcaa
agaatgttatttgaatacagacaacaacatcctggacctgtcataggagtcttagaatgc
cctaaacttcaagctataaaggcagctgtacgagcacttgatgatttcccatgtgtaacc
attcctagcaatgcacgagacaacaactaccaggctcttggttggcaagcaacagctggt
agaacaagcatgcaacgttgtgctgcatcaacccaatggttcaatgaaagaatttcactt
gctagatatgcacatgtcccattggggaactttgaactagattggcttcttttcactgct
gacgtgttcttttcaagggcactacgtgatcaacagcaggtactatggatatctgatgat
ggtattcctgatttaggaggcacatatgaaggagatacttgctttgctgatgaagtcatt
cagcctgctcttacttatcctggtgcatatagacgagttgctgttgagcttaagatccat
catttggcagtcaattctctcctaaagtgcagccaagtagatgaattggaaggagggcca
gtcggtagctttgcaaatgacacatctactggtccaaatggcactgaaactgaatttgat
gatgctagcttatgtatacctgctttccaagtgctgaagcaactcattcagcgatgcatt
tcagatgcagtatcttctggaaatgtgttcgctgatgcaatattgcagcatctctaccgt
tggctttgcagcccacggtcaaaacttcatgacccagctctccatcgtcttcttcataat
gtcatgaagaaggtctttgctctcatgctggcagaatttcgaaagcttggggctaatgtc
atctttgcaaacttttctaagataatcatagatactggaaaagttgaactgccatccgca
cgtgcatactgtgatagcttactgaagacactgcagacaagggatatttttgagtgggta
gagctggaacctttgcattattggcattccttacttttcatggaccagtataactatggt
gggattcaggctaaaatgcaaaatgaaacatctgaggacggtgcagatggtgacaatgat
attgacattgtctcaagctggaacatagctgaataccttcctaaagctacacaagatcac
tttgtcttaattgtatcggagtttctatatgttccatggaaatacatgaaagaacaagta
gctcttcgatcaactacaagggatgatacctcatgcactccgtctataacaatcctggct
gctgaaaaccttgaggtccaagtcataggatatctccgtaatcagataagcaattacttt
gcagacaagcttctcagaattgtaagcgatatacttcatcatttcaaaggaaaaggcaaa
tccgaatcagttgaacatgcaaaccaagaacctgatccccacacacacaagggagatgct
gcattagagttcattaagcatatctgtgctgttcttgctcttgatcagaatgttcagcat
gatattctgagaatgaggaagaacttgttaaagttagttcgtgtaaaagagttttctccg
gaagcacaattccaagatccatgtgcctcgttcactctcccaaatgtgatttgcagctat
tgcaatgactgtcgggatcttgatctctgccgtgattcaacactccaaggtcaggagtgg
agatgtgctgtgccgcagtgtgggcaaccatatcaccgtgaacagatggaaaatgcactt
ctacaggtagtccgtcagcgagagaggctctaccacttgcaggatttggtctgcctccgc
tgcaggcaagtgaaagcagcacatttatctgagcaatgctcctgtggaggtgcattccga
tgcaaggaagaatcatcacaatatctcagtaagatgcaggttttcctaaatgttgcggtc
agtcaaaagttccagctgcttcaggattgtgtccaatggattctagaagttcgatga

DBGET integrated database retrieval system