KEGG   Oryza brachyantha (malo sina): 102722754
Entry
102722754         CDS       T02995                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102722754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:obr03036]
    102722754
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     102722754
    NSL complex
     102722754
   HMT complexes
    COMPASS/SET1 complex
     102722754
    COMPASS/SET1 complex (yeast)
     102722754
    MLL-HCF complex
     102722754
    MLL3/MLL4 complex
     102722754
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102722754
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I WDR55 WD40_Gbeta WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_Aladin NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st CFAP251_N WDR90_beta-prop_4th DSE1_N Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_VPS8 ASA1 Beta-prop_RIG_2nd Beta-prop_Nup120_160 PAC11 Beta-prop_SPT8 eIF2A Beta-prop_HPS5 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_NWD2_C TRM82_WD WD40_like Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_NUP159_NUP214 PROPPIN BCAS3_WD40 PEP5_VPS11_N WDR54 DUF7165 Nucleoporin_N TAF1C_beta-prop CPSF_A
Other DBs
NCBI-GeneID: 102722754
NCBI-ProteinID: XP_006650523
UniProt: J3LSD6
LinkDB
Position
3:24192464..24196788
AA seq 318 aa
MAAEEDSPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLSPVAELAG
HGEGVSDLAFSPDGRLIASASDDRTVRIWDLGDGGEPRLMKTLTGHTNYAFCVAFSPHGN
MLASGSFDETVRVWEVRSGRCLRVLPAHSEPVTAVDFNRDGAMIVSGSYDGLCRIWDSAT
GHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKLRLWNFSAGKFLKTYTGHVNTKYCI
PAAFSITNGKYIVSGSEDKCVYIWDLQTRKILQKLEGHTDTVIAVSCHPNENMIASGGLD
SDKTVKVWAQKEEDQMEI
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcggcggaggaggacagcccggggtatgcgctgcgcgcgacgctggcggggcaccgc
cgcgcggtgtccgccgtcaagttctccccggacggccgcctcctcgcgtcggcgtccgcc
gacaagctgctccgcgtctggagcacctccgacctctcccccgtcgcggagctcgcgggg
cacggggagggggtgtccgacctcgccttctcccccgacggccgcctcatcgcctccgcc
tccgacgaccgcaccgtccgcatctgggacctcggcgacggcggcgagccccgcctcatg
aagacgctgaccggacacaccaactacgccttctgcgtcgccttcagcccccacgggaac
atgctcgcctcgggctcctttgacgagacggtgcgcgtgtgggaggtcaggtcggggagg
tgcctccgcgtgctgccggcccactccgagcccgtcaccgccgtcgacttcaaccgcgac
ggggccatgattgtgtccgggagctacgacggcctctgccgcatatgggactccgccacc
ggccactgcatcaagactctcatcgacgacgagagcccgccggtgtccttcgccaagttc
tcgcccaacgggaagttcgtgcttgcggccactcttgatagcaagctgaggctctggaat
ttttcagctgggaaatttctcaagacatacactggccatgtgaacacaaaatactgcatt
ccagcagcattttcaatcaccaatggcaagtatattgtcagtggctcagaggataagtgt
gtctacatatgggatcttcaaacaagaaagattttgcagaaattggaaggtcatacagac
acagtcatcgccgtgtcatgccaccccaatgaaaacatgattgcatcaggaggacttgac
agcgataagacagtgaaagtatgggcccaaaaggaagaagatcaaatggaaatctaa

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