Oryza brachyantha (malo sina): 102722765
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Entry
102722765 CDS
T02995
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obr03016
]
102722765
Enzymes [BR:
obr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102722765
Transfer RNA biogenesis [BR:
obr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102722765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
DUF6666
Motif
Other DBs
NCBI-GeneID:
102722765
NCBI-ProteinID:
XP_006653419
UniProt:
J3LY12
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Position
4:complement(10888731..10892515)
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AA seq
625 aa
AA seq
DB search
MEMEDIEDVLGPAGFSGGGAPPGLRLPLAAVAVKPKRPRSSRVAQTRPQPEARIPGTQTI
YVKTFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKNPSQSAMTTLISKC
KSANKPLVVAGCVPQGSRDLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPS
LDLPKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIESLVDRVKIVVSEGVREI
WLSSEDTGAYGRDIGTNLPNLLNAIVAELPADRSTMLRIGMTNPPFILEHLKEIASVLCH
PCVYSFLHVPVQSGSDAVLTAMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGESD
EDFSQTVNLVKEYQLPQVHISQFYPRPGTPAARMKKVPSVEVKKRSRELTSVFESFSPYR
GMEGKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADVKITSVGRWSVFGEV
IEGSVVAKETHKQNHAELQEEYRPSQVEEATCCATDSCGACACSDAAKQCSSGPQRCEDP
ANAPQTSSGDAVQSKLVRRNVEGTAKSSESDPAEVVVAKVQHLNVATRRFPNVDTILWGG
LAVSFATTVALIVVLAYKMSSTLSY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagacatcgaggacgtgctgggaccggccgggttctcgggcggtggtgcg
cctccggggctacgcctcccgctggccgccgtcgccgtcaagcccaagcgcccgaggtcg
tccagggtcgcgcagacacggcctcaacccgaggcccggatccccggcacgcagacgata
tatgtgaagacgttcgggtgctcgcataaccagagtgacagtgagtacatgtcggggcag
ctctcggcgtttggctacgcaatcaccgaagagcctgaaggagcagatctgtggctaatt
aacacatgcacagtgaaaaatccaagtcaatctgccatgacaactctgatatcgaagtgt
aagagtgcaaacaagcctttagttgtggctggatgtgtaccacaaggaagccgggatctg
aaagagctcgaaggtattagcattattggagtgcaacagattgaccgtgttgttgaagta
gttgaagagaccttaaaaggacatgaggttcggctgttgagtcggaaaacactgccctca
cttgatttacctaaggtaaggaagaacaagtttattgagattcttcctattaatgtcggg
tgtttgggtgcctgcacatattgcaagacaaagcatgctcgtggtcatcttggaagctat
actatagaaagtttggtagatcgcgtgaaaattgttgtctctgaaggtgtccgagaaatc
tggttgagcagcgaggatactggtgcttatggcagggatatcggtacaaatcttccaaat
ctattaaatgcaattgttgctgagcttcctgcagacagaagcacaatgctccgcattggc
atgaccaatcctcctttcatactggagcatttgaaggaaattgctagtgttttgtgccat
ccctgcgtgtattctttcctccatgttcctgtgcaatcaggaagtgatgcagttttaacg
gcaatgaatcgtgagtacactgtgagtgaattcaggagggtagttgacacactctgtgag
cttgtccctggaatgcaaattgctacagatattatttgtggatttcctggtgagagtgat
gaagatttctctcaaactgttaaccttgtaaaagaatatcaactccctcaggttcacata
tcacaattctaccctagaccaggaacacctgctgctaggatgaaaaaagttccaagtgtt
gaagtgaagaaaaggagccgtgaattgacctcagttttcgagtcattttcaccctaccga
ggaatggaaggcaaagtagagaggatatggatcaccgaaatagccaccgatggtgttcat
ttggttggacataccaaaggatatatccaggtgcttgtcattgctcctgacagcatgtta
ggaacatcagcagatgtgaaaatcacatccgttgggagatggtctgtgtttggcgaagtg
attgaaggatccgttgtagcaaaggaaactcataagcaaaatcacgctgaactacaagaa
gaatataggccaagtcaggtcgaggaagccacttgctgcgccacggactcttgtggtgcc
tgtgcatgctctgatgcagcaaagcagtgcagttccggtccacagcgatgtgaagatcca
gctaacgcgccccaaacaagtagtggtgatgctgttcagtctaaacttgtgagaagaaat
gttgaggggacggcgaaaagcagtgaaagtgatccggcagaagtagtggtagctaaggtt
cagcatctaaatgtagcaactaggaggttcccaaatgttgataccattctgtggggtggc
ttggccgtcagctttgccacgaccgtagccctcattgtagtgcttgcatacaagatgtct
tccacgctctcctattga
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