Oryza brachyantha (malo sina): 102722812
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Entry
102722812 CDS
T02995
Name
(RefSeq) PHD finger protein At1g33420-like
KO
K26271
PHD finger protein MS1/MMD1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102722812
Transcription factors [BR:
obr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102722812
BRITE hierarchy
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
102722812
NCBI-ProteinID:
XP_040384957
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Position
11:complement(4682663..4686659)
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AA seq
738 aa
AA seq
DB search
MAVRRRASAVAMAVRGCGGGRAPKRARVTAPGPSLLDDMGAFPAEAADGEKPRPAPAPAP
AQSSSSFRARVREFLARCAVPSPEMEGLSWPGTSSWQVAFACGDGGGEAAAAVMEVVEEE
VAKARRVHCEHCTVAGWSKHPVCSKRYHFIIRNENEIGTSKTCRCCGFMVALHETRCPSC
NHVSLSRDDPEDWDYVQLESPGHLLHGIVHENGFGHLVRVNGREGGSSVMTGSQLMDFWD
QLCRNLRVRKVSVMDVSKKYGVDYRSLHAVATGCSWYGLWGFKLSSGSFGITPEAYCKAV
DSISSVPLSNFFPHSRSPRNQLQNTIAFYQSLSSYPLRTIRELFLYMMGLATSNSVQHHT
HPVHKKKQADAVHCQEMACAAHYQEEKWPEEELQRTTDVALKILRAAGRWVATRTLKAVT
SHPIGSPQLVDYCIKTLGGTRTNDGMVVAVRCNSEMNTLEYRLTAETLFPANNICTLTQD
HLSRDIKFLYDALLYPYTMHPCRPEENYEQTRRSAMILLDCKQFIKHYDLEEDFLPQNPS
QLHIWCQVELAEQVDDPPCIPVELLTLPQTATVGDLKAEAVRAFRDIYLMFQSFVADQLL
DCATASETTQINLLFGSKGVVHIKGRCIGGERRFAVYRMERGVDKWTVICPCGAKDDDGE
RMLSCDSCHVWMHTRCAGISDFDRVPKRYVCTSCKLTHKPKSSGSRLMYSSTAPYKRCKT
STGSFSNAAKGLLRPHIH
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaggcgggcgtcggcggtggcgatggcggtgcgcggctgcggcggcggg
agggcgccgaagcgggcgcgggtgacggcgccggggccgtcgctgctcgacgacatgggg
gcgttccccgcggaggcggcggacggggagaagccgaggccggcgccggcgccagcgccg
gcgcagtcgtcgtcgtcgttccgagcccgggtgcgggagttcctggcgcggtgcgcggtg
ccgtcgccggagatggaagggctgtcttggccgggcacgtcgtcgtggcaggtcgcgttt
gcctgcggcgacggcggcggcgaggcggcggcggcggtgatggaggtggtggaggaggag
gtggccaaggcccggcgggtccactgcgagcactgcactgttgctggctggagcaagcac
cctgtttgctccaagaggtaccacttcataattcgcaatgagaacgaaattggcacctcc
aaaacctgcaggtgttgtgggttcatggtggcactgcatgaaacaagatgcccatcctgc
aaccacgtcagcctctctcgtgacgatccggaagattgggactatgtgcagctggagagt
ccaggtcatttgctgcatggcatagtccatgaaaacggctttggccaccttgtccgggtc
aatggccgtgagggaggatccagtgtcatgacaggatcccaactgatggacttctgggat
cagctctgcagaaacctcagggttagaaaagtttcagtgatggatgtttcaaagaagtat
ggtgttgactatcgaagcctccatgctgttgccactggctgttcttggtatggcctttgg
ggattcaaactaagcagcggaagctttggaatcacacctgaagcttactgcaaagctgta
gacagtatatcctcagtgccactatctaacttcttcccccactcccggtctcctcgaaac
cagttacagaataccattgccttctaccaatctctctcaagttaccctctcagaacaatc
cgtgaactcttcctctacatgatgggacttgccaccagcaacagtgtgcagcaccatacc
cacccagtgcacaaaaagaaacaggcagatgctgtccattgtcaagagatggcatgtgcg
gcccattatcaagaggagaaatggcctgaagaggaattacagcgaacaacagatgttgct
cttaaaattctccgtgctgcaggtagatgggttgctacacggacattaaaggcagttaca
tcccatccaattggttcgccacagctagtcgattactgcatcaagacgctgggtggtaca
agaaccaatgatgggatggttgtcgcagttcgatgcaacagtgagatgaacacattagag
tacaggcttacagctgaaaccctcttcccagcaaataacatatgcaccctaacccaagat
catctatctcgtgacatcaagttcttgtatgatgcactcctctacccatatacaatgcat
ccttgtagaccagaagaaaattatgagcaaaccaggaggtctgcgatgatccttttggac
tgcaagcaattcatcaagcattatgatctggaagaagacttcttgcctcaaaacccatca
cagttgcacatttggtgccaagtggaactagctgaacaggttgatgatccaccttgtatt
ccagtggagctcttaacacttccacaaacagcaactgttggcgatctaaaagcggaggct
gttagagcatttcgagacatctacttaatgtttcagagctttgtagctgaccaacttctt
gattgtgcaactgcaagcgagaccacacaaatcaatctcttgtttggatctaagggagtt
gttcacatcaaaggcaggtgcattggaggtgaacgacggtttgcagtttacagaatggag
aggggtgtggacaaatggacggttatttgcccatgtggagcaaaggacgacgatggtgag
agaatgctatcctgtgactcttgccatgtgtggatgcacactaggtgtgctggaatcagt
gattttgatagggttccaaagagatatgtatgtacatcatgtaaactaacccacaagcca
aagagcagtggttccaggctaatgtatagtagtactgcaccttacaaaagatgcaagact
agcacaggttcctttagcaatgcagctaaaggattactgaggcctcacatccactaa
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