Oryza brachyantha (malo sina): 102722820
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Entry
102722820 CDS
T02995
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00061
Fatty acid biosynthesis
obr00071
Fatty acid degradation
obr01100
Metabolic pathways
obr01212
Fatty acid metabolism
obr04146
Peroxisome
Module
obr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
102722820
00071 Fatty acid degradation
102722820
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102722820
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
obr01004
]
102722820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102722820
Enzymes [BR:
obr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
102722820
Lipid biosynthesis proteins [BR:
obr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
102722820
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of breast milk
102722820
Exosomal proteins of breast cancer cells
102722820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Motif
Other DBs
NCBI-GeneID:
102722820
NCBI-ProteinID:
XP_006664333
UniProt:
J3NBC3
LinkDB
All DBs
Position
12:complement(1700807..1709657)
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AA seq
704 aa
AA seq
DB search
MGREEEESPMGSAQRRLRAVSAHLPPPEPASAAGVDLAANPTAGEYANVQGYSAVLPEKL
QTGKWNVYRSAKAPLRLIDRFPDNPDIATLHDNFVYAVETFRDCRYLGTRVCADGTVGDY
KWMTYGEASTNRTAIGSGLIYHGIPQGACIGLYFINRPEWTIVDHACAAYSYVSVPLYDT
LGPDAVQFIVNHATVEAIFCVPQTLSTLLSFITQMPCVRVIVVIDGDNANMASSSTTTGV
KIITYSRLLSQGKMSSQSFRPPKPEDVATICYTSGTTGTPKGVVLSHGNLIANVAGSSLV
IKFYPSDVYISYLPLAHIYERVNQIAVLHYGVAIGFYQGDNLKLMDDLAVLRPTVFPSVP
RLYNRIYAAITNAVKESGGLKEKLFHAAYNAKKQAIINGKNPSPMWDKLVFNKIKARLGG
RVRLMTSGASPLSADVMEFLRICFSGDVLEGYGMTETSCIITAMNSGDRLIGHVGSPNPS
CEIKLVDVPEMNYTSEDQPYPRGEICVRGPTIFCGYYKDEIQTREAIDEDGWLHTGDIGL
WLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFIYGDSLNSCLVAIVAV
EPEVLTAWAASEGIQYEDLRQLCADPRARAAVLADMDSIGKEAQLRGFEFAKAVTLVAEP
FTLENGLLTPTFKVKRPQAKAYFVKEIADMYSQLREAESIKPKL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggaggaggaggagtccccaatgggctcggcccagcgccggctgcgcgccgtc
tccgcccacctcccgccgccggagcccgcctccgccgccggcgttgacctcgccgccaac
cccaccgccggcgagtacgcgaacgtgcagggctacagtgctgtactccccgagaagtta
caaactggaaagtggaatgtataccggtctgcgaaggcacctctaaggttaatagataga
ttccctgataacccagacattgcaacgcttcatgataatttcgtgtatgcagttgagacc
tttagggactgtagatacctgggcacaagagtctgcgctgatggaacagttggggactac
aaatggatgacatatggagaagctagtacaaacaggactgcaataggttctggtcttatt
tatcatggaatacctcaaggtgcatgcattggtttgtattttataaacagacctgagtgg
accatagttgatcatgcctgtgcggcatattcatatgtatccgtgccactttatgatact
ctaggtccagacgcagtccagttcattgttaaccatgctacagtagaggctattttctgt
gtgcctcaaacactaagcactctgttaagcttcataactcaaatgccatgtgttcgtgtt
atagtggtaattgatggagacaatgcaaatatggcatcttcctcaacaactactggagtg
aaaattataacttactccagactactaagccagggaaagatgagttctcaatcttttcgc
cctccaaaacctgaagatgttgccactatttgttacactagtggtacaactggcacaccg
aagggagttgttctttctcatgggaatttaattgcaaatgtagcaggatcaagcctagtc
attaagttttacccatctgatgtgtatatctcatatctacctttagctcacatctatgag
agagttaaccagattgcagtgcttcactatggtgttgccattggattctaccaaggggat
aatttgaagctgatggatgatctggctgtattgagaccaacagtatttcctagtgtgccc
cggctatataacagaatttatgctgcaattacaaatgctgtcaaggagtcaggtgggctg
aaagaaaaattgtttcatgctgcatacaatgctaagaagcaagcaattattaacgggaaa
aatccatccccaatgtgggacaagttggtatttaacaaaataaaagctaggcttggtgga
cgtgtgagacttatgacttcaggcgcttctccattgtcagcagatgttatggaattccta
agaatatgcttcagcggtgatgttctcgaaggatatggaatgacagagacatcctgtatc
atcactgcaatgaattctggtgataggttaattggtcatgttggatccccaaatccatcc
tgtgagattaaactagtggatgtcccagaaatgaattacacctctgaggatcaaccatat
cctcgtggagaaatttgtgttaggggacctacaatattctgtggttactataaagacgaa
atccaaactagagaggccattgacgaggatggttggttgcacactggagacataggtttg
tggctgcctggggggcgtctaaaaattatagataggaaaaagaacattttcaagttagct
caaggagaatacatagctcctgagaagattgagaatgtctatgctaagtgcaagtttatt
gcacagtgctttatatatggtgatagtttaaattcatgtttggttgccatagtagcagtt
gaaccagaggtgttgacagcttgggctgcatcagaaggaatccagtacgaggatttaaga
cagctttgtgctgatccgagagcaagagctgctgtcctggctgacatggactctattgga
aaggaggcacagctaagaggttttgaatttgccaaagctgttacccttgttgctgaacct
ttcacgttagaaaatggtctcctcacccctacattcaaggtcaaaagaccacaagctaag
gcatactttgtaaaagaaatagcagatatgtattctcaactgcgtgaagcagaatcaata
aagcccaagctgtaa
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