Oryza brachyantha (malo sina): 102722835
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Entry
102722835 CDS
T02995
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102722835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102722835
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102722835
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102722835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
102722835
NCBI-ProteinID:
XP_006648046
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Position
2:25840362..25842020
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AA seq
403 aa
AA seq
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MAFLATCFDSSFSMNTVASATSPVRSIGFFSVLRRCRISATLTTTAPPTSTFSFESPHSS
QNLEPSSLLSLPWFPFVSPRSSNQIRRVGGVEILRQIDCGRDSGVPMSNPTAAVIPRPSG
GGGSEEEVEEEEEEEELVEIREVWADNLEKEFALIRDVVDKFPFVAMDTEFPGIVCRPVG
AFRSSADYNYATLKANVDMLHLIQLGLTFSGPRGELPVMGDGRRRCVWQFNFREFDDAHD
IFASDSIELLRRSGIDFRRNAERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLL
KILTCSSLPDTQASFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGESHQ
AGSDSFVTSCAFWKLKDSFFGGSTEKYAGVLYGLNADNGVSVH
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcctggccacgtgcttcgattcgtccttctccatgaacaccgtcgcttccgcg
acgtcccctgttcgcagcatcggctttttcagcgttcttaggcgctgccgcatcagcgcg
accctgaccaccacggcaccacccacctctaccttctctttcgaatccccccattcctct
caaaatctagagccttcttctctcctctcccttccctggttccccttcgtctcgcccaga
tcctcaaatcaaatccgccgcgtcggcggcgtcgagatcctgagacagatcgattgcggg
agggattccggcgtgccaatgtcgaatcccacggcggcggtcatccccaggcccagcggc
ggaggagggagcgaggaggaggtggaagaagaggaggaggaggaggagctggtggagatc
cgggaggtgtgggcggacaacctggagaaggagttcgcgctgatccgcgacgtggtggac
aagttccccttcgtcgcgatggacacggagttcccgggcatcgtgtgccgccctgtcggc
gccttccgctcctcggccgactacaactacgccaccctcaaggccaacgtcgacatgctc
cacctcatccagctcggcctcaccttctctggcccgcgcggcgagctccctgttatgggt
gacggccgccgccgatgtgtctggcagtttaacttccgcgagttcgacgatgctcatgac
atcttcgcctccgactccatcgagctcctccgccgcagtggcatcgatttccgacgcaac
gcggagcgtggggtcgacgcccgtcgctttgctgagctcctcatgtcctccggtgttgtg
ctcaacgactccgtctactgggttaccttccatgcgggctacgactttggttacctgctc
aagatactcacttgcagcagtcttccagacacgcaggctagcttctttaagctcatgaag
atatatttccccaccgtttatgacatcaaacacctcatgaagttctgcaatagcctgcac
ggtgggctgaacaagcttgcagagctacttgacgtggagcgtgtcggagagtctcatcag
gccggttccgatagttttgtcacttcctgcgcgttctggaagctcaaggattcgttcttc
ggtggctctaccgagaaatatgctggagtattgtatgggctcaatgcagataatggtgtc
agtgtacattga
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