Oryza brachyantha (malo sina): 102722912
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Entry
102722912 CDS
T02995
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102722912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102722912
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
RNases
102722912
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF7181
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
102722912
NCBI-ProteinID:
XP_006663883
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All DBs
Position
12:3346449..3351806
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AA seq
610 aa
AA seq
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MVYLQKGPYNRAIITNLRTSSAFLGGRARPQLLGGIPCIINNPPPLLPPDRQSPRSRAAD
MSTPSASGEAAAATYYDVYGPNAKPDVIFKEATSNSTLNLQDVQGLVTWVIGDGMLPSWV
FVKNKPLIPKVVLLYVPGLDAALYMSQSRHLSSLKELCGNPKPVLASSCIPDERHTIDAL
LTCRVKRKRGLKTTNQSNESDGQEKLSSLDDLKDIPFPVKYYTLSEKEMEDNGYNFHLQG
FVPTVSAPPGSSPYGILALDCEMCVTEAGFELTRVTLVDIKGEVVLDKLVKPANPITDYN
TRFSGITAEMLADVTTNLQEIQEEFVGLVHKETVLVGHSLENDLTALRISHDLIIDTAVL
YKHNRGHRFKIALRVLAKKFLNREIQNTGSGHDSVEDAKATLELALLKIKNGPDFGSPPL
TSRRKLASILHDSGKKCSLIDDASILERYSDDACNSIAVFSDDDALSRLMKEVKNNKISF
VWTQFSKLLSYLRTRAQDPDRVKSCVAEAIALQTCDRKTAQKKTKHQTCPELKEILIELD
KKIRKLYSVLPDNAMLIVCSGHGDTPLVQSLRKMLKHEEETIEDRESIVKALEDIQAQAE
VALCFCCVKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatttacagaaaggcccctacaatcgcgccataattacgaatttgcgtactagt
agtgcgtttttagggggtcgcgcgaggccccaactactcggagggattccctgcataata
aacaaccctcctcctcttcttcctcccgaccgccaaagccctagaagccgcgccgccgac
atgtcgacgccctccgcctccggcgaagccgccgccgccacgtactacgacgtgtacggc
cccaacgctaaacctgatgtcatttttaaggaggccacttcaaactctacattaaatttg
caggatgttcaggggctagtaacttgggtcattggtgatggcatgttaccttcttgggtg
tttgttaaaaacaagcctcttataccgaaagttgtccttctatatgttcctggccttgat
gcagctttatacatgtcgcaatcccgccacctttcttctttgaaagaactttgtggcaat
ccaaaacctgttctagcttcaagctgcataccagatgaaaggcataccatcgatgcactc
ctaacatgcagagtaaagcgaaagcgcgggttaaaaacaactaaccaatcaaatgaatct
gatggccaagaaaagctatcaagtttggatgacctaaaggacataccatttcctgttaaa
tactacacgctttctgaaaaagagatggaggataatggatacaacttccatttacaaggt
tttgtccctactgtttcagctcctccgggctcttctccatatggaattcttgcacttgac
tgtgagatgtgtgtgactgaagctggatttgaacttacaagagtgacattagttgatatt
aaaggagaggtggtactagataaactagttaagcctgccaatccaatcactgattacaat
acaaggttcagtggaataactgctgagatgctagctgatgtgaccacaaacctccaggag
attcaggaggagtttgttggccttgtgcacaaagaaacggttcttgttgggcattctttg
gaaaatgatcttacggcattacggatatctcatgatttgatcattgatactgctgttctg
tacaaacacaatcgtggccaccgctttaagattgctttacgtgtcctggcaaaaaagttt
cttaaccgggaaatccagaacacagggtctgggcatgacagcgtggaggatgctaaagcc
actctagaacttgctttattgaaaataaaaaatggtcctgattttggctcaccgccattg
acgtcgcgacgaaagttggcttctatactacatgatagtgggaaaaaatgctctctcatt
gatgacgcctctattcttgagcgatattcagatgatgcttgtaattcgatagcagttttc
tcagatgatgatgcgctatccagattaatgaaagaggtaaaaaacaacaaaatcagtttt
gtctggactcaattctcaaaactgctatcatatcttcgtacaagggcccaagatccagat
agggtgaaatcatgtgttgcagaggctattgcattgcagacctgtgatagaaaaaccgcc
cagaaaaaaacaaagcatcaaacttgtcctgaactgaaggaaattctaattgagttggac
aagaaaattagaaaattatacagcgtcttacctgataatgcaatgcttattgtatgtagt
ggtcatggtgatacacctctggtgcaaagtttacggaaaatgctgaagcatgaagaagaa
acaatagaagatcgagaaagtatcgttaaagcattagaagatattcaagcccaggcagaa
gttgctctatgcttctgttgtgtcaaacattag
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