KEGG   Oryza brachyantha (malo sina): 102722912
Entry
102722912         CDS       T02995                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102722912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:obr03009]
    102722912
Ribosome biogenesis [BR:obr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    102722912
SSDB
Motif
Pfam: RNase_T DUF7181 Phosphodiest
Other DBs
NCBI-GeneID: 102722912
NCBI-ProteinID: XP_006663883
LinkDB
Position
12:3346449..3351806
AA seq 610 aa
MVYLQKGPYNRAIITNLRTSSAFLGGRARPQLLGGIPCIINNPPPLLPPDRQSPRSRAAD
MSTPSASGEAAAATYYDVYGPNAKPDVIFKEATSNSTLNLQDVQGLVTWVIGDGMLPSWV
FVKNKPLIPKVVLLYVPGLDAALYMSQSRHLSSLKELCGNPKPVLASSCIPDERHTIDAL
LTCRVKRKRGLKTTNQSNESDGQEKLSSLDDLKDIPFPVKYYTLSEKEMEDNGYNFHLQG
FVPTVSAPPGSSPYGILALDCEMCVTEAGFELTRVTLVDIKGEVVLDKLVKPANPITDYN
TRFSGITAEMLADVTTNLQEIQEEFVGLVHKETVLVGHSLENDLTALRISHDLIIDTAVL
YKHNRGHRFKIALRVLAKKFLNREIQNTGSGHDSVEDAKATLELALLKIKNGPDFGSPPL
TSRRKLASILHDSGKKCSLIDDASILERYSDDACNSIAVFSDDDALSRLMKEVKNNKISF
VWTQFSKLLSYLRTRAQDPDRVKSCVAEAIALQTCDRKTAQKKTKHQTCPELKEILIELD
KKIRKLYSVLPDNAMLIVCSGHGDTPLVQSLRKMLKHEEETIEDRESIVKALEDIQAQAE
VALCFCCVKH
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggtgtatttacagaaaggcccctacaatcgcgccataattacgaatttgcgtactagt
agtgcgtttttagggggtcgcgcgaggccccaactactcggagggattccctgcataata
aacaaccctcctcctcttcttcctcccgaccgccaaagccctagaagccgcgccgccgac
atgtcgacgccctccgcctccggcgaagccgccgccgccacgtactacgacgtgtacggc
cccaacgctaaacctgatgtcatttttaaggaggccacttcaaactctacattaaatttg
caggatgttcaggggctagtaacttgggtcattggtgatggcatgttaccttcttgggtg
tttgttaaaaacaagcctcttataccgaaagttgtccttctatatgttcctggccttgat
gcagctttatacatgtcgcaatcccgccacctttcttctttgaaagaactttgtggcaat
ccaaaacctgttctagcttcaagctgcataccagatgaaaggcataccatcgatgcactc
ctaacatgcagagtaaagcgaaagcgcgggttaaaaacaactaaccaatcaaatgaatct
gatggccaagaaaagctatcaagtttggatgacctaaaggacataccatttcctgttaaa
tactacacgctttctgaaaaagagatggaggataatggatacaacttccatttacaaggt
tttgtccctactgtttcagctcctccgggctcttctccatatggaattcttgcacttgac
tgtgagatgtgtgtgactgaagctggatttgaacttacaagagtgacattagttgatatt
aaaggagaggtggtactagataaactagttaagcctgccaatccaatcactgattacaat
acaaggttcagtggaataactgctgagatgctagctgatgtgaccacaaacctccaggag
attcaggaggagtttgttggccttgtgcacaaagaaacggttcttgttgggcattctttg
gaaaatgatcttacggcattacggatatctcatgatttgatcattgatactgctgttctg
tacaaacacaatcgtggccaccgctttaagattgctttacgtgtcctggcaaaaaagttt
cttaaccgggaaatccagaacacagggtctgggcatgacagcgtggaggatgctaaagcc
actctagaacttgctttattgaaaataaaaaatggtcctgattttggctcaccgccattg
acgtcgcgacgaaagttggcttctatactacatgatagtgggaaaaaatgctctctcatt
gatgacgcctctattcttgagcgatattcagatgatgcttgtaattcgatagcagttttc
tcagatgatgatgcgctatccagattaatgaaagaggtaaaaaacaacaaaatcagtttt
gtctggactcaattctcaaaactgctatcatatcttcgtacaagggcccaagatccagat
agggtgaaatcatgtgttgcagaggctattgcattgcagacctgtgatagaaaaaccgcc
cagaaaaaaacaaagcatcaaacttgtcctgaactgaaggaaattctaattgagttggac
aagaaaattagaaaattatacagcgtcttacctgataatgcaatgcttattgtatgtagt
ggtcatggtgatacacctctggtgcaaagtttacggaaaatgctgaagcatgaagaagaa
acaatagaagatcgagaaagtatcgttaaagcattagaagatattcaagcccaggcagaa
gttgctctatgcttctgttgtgtcaaacattag

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