Oryza brachyantha (malo sina): 102722999
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Entry
102722999 CDS
T02995
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
obr03410
Base excision repair
obr03420
Nucleotide excision repair
obr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102722999
03410 Base excision repair
102722999
03420 Nucleotide excision repair
102722999
03430 Mismatch repair
102722999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102722999
03400 DNA repair and recombination proteins [BR:
obr03400
]
102722999
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102722999
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102722999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
AAA_5
PTCB-BRCT
RuvB_N
nSTAND3
AAA_17
AAA_assoc_2
BRCT_2
AAA_16
AAA_24
Sigma54_activ_2
AAA_18
Gp44_lid
AAA_14
RNA_helicase
Zeta_toxin
NPHP3_N
NTPase_1
AAA_33
AAA_2
Mg_chelatase
RsgA_GTPase
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102722999
NCBI-ProteinID:
XP_015698034
UniProt:
J3N945
LinkDB
All DBs
Position
11:13919978..13930204
Genome browser
AA seq
1020 aa
AA seq
DB search
MSSDIRKWFMKAQDKNGGAAKPAGVGGAAAAAPAAKKPVLSIPEKPAPSLAPCDQDCSAR
RKTSKYFASKTEEEDASAGNGAGRGLSKRKLQKGSDELEDDMKPLRATEQEDDDDFMAPS
KRKTPVKQPPSKKLKGASNAETHAKTVGLDNDDKEDKMDEDAKTPSKAAGSGRGRGRGRG
RGGRGAGAAHGKAVGLDDDGEEDRMDEDAKTPSKSTGRGRGGASGGRGRGGGGRGFMNFG
ERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLIKRYGGRVTGSISKKTS
YLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKSTVAKHQSDNNSEKQQKSPI
KSCPVKVERKDANQITTGKNISPKSNKERVSTDNQKAKIIDRGSMQWTEKYRPKVPNDIV
GNQSMVKQLHDWLKGWDDQFLHSGQKGKGKKQSDGGSKKAVLLSGPPGIGKTTTAKVVSQ
MLGLQAIEVNASDSRGKADSKIERGVGGSTSNSIKELISNVTLNYSNNRSKQPKAVLVMD
EVDGMSAGDRGGVADLIASIKISKIPIVCICNDRYSQKLKSLVNYCLLLNFRKPTKQQMG
KRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQRLSSST
KDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITVGKDDSG
VKRMNFLARAAESIADGDIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREILEAGER
NFNRFGGWLGKYSTTNKNKRLLEDAHSHILASQQANLDRESLRLDYLTLLLQQLTDPLKT
MPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKAYKQGSS
SRVVRAADLVNIPGMKKPLKKRVAAILEPVEESVPDENGVASAEGDDEDSSDAENNDELV
PGDRKPKLDLQSDKKKGIQVQLDLKSNGTGSNSKKAPAGRSRAPASAGKAAGGSGGKRKR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatatcagaaaatggttcatgaaggcgcaagacaagaatggtggcgcagcg
aagccggctggggttggaggggcagccgccgccgcgccggcggcgaagaagcctgtgctc
agcattccggagaagccagcgccgtctttggcaccttgtgatcaagattgttcagctaga
aggaagactagcaagtactttgcatccaaaactgaagaggaagatgccagtgcaggaaat
ggtgcagggagaggtttgtctaagagaaaacttcagaaaggcagtgatgagcttgaggat
gacatgaagcctttgcgagcaacagaacaagaagatgatgatgactttatggcaccttca
aaaaggaaaactccagtgaagcagccaccatcaaagaagttgaagggtgcgtctaatgct
gaaactcatgcaaagactgttggccttgataatgatgataaggaggacaagatggatgaa
gatgctaaaaccccttccaaggcagctggaagtggaaggggaaggggaagggggaggggg
agaggaggaagaggagcaggagcagcccatggaaaggcagttggtcttgatgatgatggt
gaggaggacaggatggatgaagacgctaaaaccccttccaaatcaactgggaggggaagg
ggaggagcttctgggggaagagggagaggagggggtgggagaggtttcatgaattttggt
gaaaggaaggatcctccgcacaaaggggagaaggaagtcccagagggtgctcctgactgt
ttaactggtttgacattcgtcataagtggtactcttgacagtcttgaacgtgaggaggca
actgatctaattaagcgttatggaggccgtgtaactggctctattagcaaaaagacgagt
taccttttggctgatgaagacgttggtggagtgaaatctaataaagcaaaagaactgggc
gtcccattcttaactgaagatggcttatttgatatgatccggaaatcaaagcctgcaaag
tctactgtagccaaacatcaaagcgataacaattcagaaaagcaacaaaaatcaccaata
aagagttgtccagttaaagttgaaagaaaagatgctaatcaaatcaccacaggcaaaaat
atttccccaaagagtaataaagaaagagtctccactgataaccagaaggccaaaatcata
gaccgtggttctatgcaatggactgaaaagtatcggcccaaggttccaaatgacatagtt
gggaaccaatcaatggttaaacaacttcatgattggttgaaaggttgggatgatcaattc
cttcattctggccagaagggtaagggaaagaagcagtctgatggtggatctaaaaaggct
gtgttgttgagtggacctccaggtattggtaagaccacaactgctaaagtcgtgagtcag
atgcttggattgcaggctattgaggttaatgcgagtgatagccgtggtaaggcagactcc
aagattgagagaggcgttggggggagcacatcaaattctatcaaagagcttatcagtaat
gtgactttgaattacagtaacaaccgatcaaaacagcccaaggctgtactagtcatggat
gaagttgatggtatgtctgctggagatcgtggtggtgttgctgatcttattgctagcatc
aagatatctaagattcctatagtttgcatttgtaatgaccgttatagccagaaattgaag
agcctagtaaattactgcttattgctcaacttcagaaaaccaacaaagcaacagatgggt
aagaggttgatggaaattgccaagaaggaaggtcttcaagctcaagagaatgcaatggaa
gagcttgctgaacgagtacatggggatattcgcatggctcttaaccatttgcaatatatg
agcctctcccagtctgtggtcaaatacgatgatataagacaacgacttagtagcagcaca
aaagatgaagatatttccccattcacggctgttgacaagctgtttggtttcaatggtggg
agattaaggatggatgagagaattgatttgagcatgagcgatcctgatttagttcccctg
attatccaggaaaactatatcaattatcggcctatcactgttgggaaggatgacagtgga
gttaaaagaatgaattttctcgcccgagctgctgaatctatagcagatggtgatatcgta
aatgtacaaataagaagatatcggcagtggcaactgtcacaagctgcttgtttatcttca
tctatagtacctgctgctttgatgcatgggaatagagagatccttgaagcaggtgaacgg
aacttcaataggtttggtggatggttgggcaagtactctaccacaaataaaaataagcgg
ctactggaagatgcccatagtcatattcttgcctcccagcaagcaaacttggacagggag
tcactgaggctggattacctcactcttctcttgcaacaattgactgaccctctcaagaca
atgcctaaggatgaagctgtgcaaaaagtggtggagtttatggatacctactctttaagc
caggaagactttgacacgattgttgaattatccaaatttaagggtcatccaaatcctatg
gatggtattcaaccagctgttaaaagtgccttgacaaaagcatacaaacagggaagtagt
tctcgtgttgttcgagcagcagatctagtaaatatcccaggcatgaaaaaaccactaaag
aaacgagtggcggcaatccttgagccggttgaagagagtgtgcctgacgaaaatggagta
gcatcagctgaaggtgacgatgaggattcctctgatgctgaaaataatgacgaacttgtg
cctggtgataggaaacctaaactggacctgcagagtgataagaagaaagggatccaagtg
cagcttgacctgaagagcaatggcaccggctcgaactcaaagaaggcgccggctggtaga
tcaagagctcctgcctctgctgggaaggctgctggaggctcaggtgggaagaggaagagg
taa
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