KEGG   Oryza brachyantha (malo sina): 107303488
Entry
107303488         CDS       T02995                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable 26S proteasome complex subunit sem1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03050  Proteasome
obr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    107303488
  09124 Replication and repair
   03440 Homologous recombination
    107303488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    107303488
   04131 Membrane trafficking [BR:obr04131]
    107303488
   03051 Proteasome [BR:obr03051]
    107303488
   03400 DNA repair and recombination proteins [BR:obr03400]
    107303488
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     107303488
Membrane trafficking [BR:obr04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    107303488
Proteasome [BR:obr03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     107303488
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     107303488
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 107303488
NCBI-ProteinID: XP_015688418
LinkDB
Position
1:9174247..9177048
AA seq 126 aa
MLNLEGTSKISQLPPSSCRHLPSFLFPKQSIDAWELRRQGFVLEAVIPRDCNAETAKADA
AVESAKMDLLKDDDEFEEFEIDQEWDDKEEGNEAVQQWEDDXDDDDVNDNFSLQLTKELE
SNLSEN
NT seq 381 nt   +upstreamnt  +downstreamnt
atgttgaatttggaagggacatctaaaatttcacaattgcccccctcttcttgtcgccat
ctgccgtctttcctctttcccaagcaaagtattgacgcgtgggagcttcggcgacaagga
tttgttctggaggcggtgattcctcgtgactgtaatgcggagacagcgaaggccgatgcg
gcggtggagtcggccaagatggacttgctcaaggacgacgatgagttcgaggagtttgag
atcgaccaagaatgggacgacaaggaagaaggcaatgaggcagttcaacaatgggaggat
gactaggatgatgatgatgtcaatgacaacttctctctgcaactcacgaaagagttggag
agcaacttatcggagaactag

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