Oryza brachyantha (malo sina): 107304336
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Entry
107304336 CDS
T02995
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
107304336
04121 Ubiquitin system [BR:
obr04121
]
107304336
Transcription factors [BR:
obr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107304336
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
107304336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
107304336
NCBI-ProteinID:
XP_040380966
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All DBs
Position
6:complement(5836479..5840328)
Genome browser
AA seq
1116 aa
AA seq
DB search
MQPSSDRRRGGNGGGGGGGGGPVAVPSSRAVWRPRSTAPRAPPPAPAAAAVPDRAAPILP
FPSTASEERPPQRRPRRRNHGSSGGQRRAPPQERPSAAPPPSAAAAAPAPTRGAPPPRAA
GAKAAAAGSDGAVPQLVQEIQDKLARGAVECMICYDMVRRSAPVWSCGSCFSIFHLPCIR
KWARSPASAADASDPDSSWRCPGCQSVHTVPARELAYTCFCGRRREPPNDLFLTPHSCGE
PCSKPLERADPAAAKGASPNDAEATRCPHVCVLQCHPGPCPPCKAFAPDRLCPCGKQTIV
RRCADRTTPVTCGQQCDRLLPCRRHRCEKVCHTGPCGDCNVLITAQCFCGKKTETLLCGD
MELKGNLSEKDGVFSCSEACDHMLACGNHACRDVCHPGPCGECDLMPGKVTACHCGKTRL
LEKRESCLDPIPTCEKVCDKKLPCGVHRCKVTCHDGECPPCVVRVEQRCRCGSSGQMVEC
YKVLEEEFHCNKPCGRKKNCGRHRCSECCCPLSKPFAQLEGGNWDPHLCQIPCGKKLRCG
QHGCQLLCHSGHCPPCLETIFNDLTCACGRTSIPPPLPCGTPTPSCPHQCLVPQPCGHPA
SHQCHFGDCPPCVVPVMRECIGGHVMLRNIPCGSKDIRCNQPCGKNRQCGIHACTRACHP
APCDAPPANGDASSSTGSRASCGQVCGAARRECKHTCTAPCHPSSPCPDLRCEFPVTITC
SCGHITATVPCGAGGASNGDNMFEISIIQKLPVPLQPVESDGRRVPLGQRKLSCDEDCAK
MERKRALAEAFDITPPNLDALHFGENSNASDLLSDLFRREPKWVLAIEERCKFLVLGKTR
GNSSGNLKVHVFCHMMKDKRDAIRLIADRWKLSVQAAGWEPKRFITIHVTPKSKPPARIL
GSKPGVPVTASHPFFDPLVDMDPRLVVAMLDLPRDADVSALVLRFGGECELVWLNDKNAV
AVFNDPARAATALRRLDYGSAYQGAAVFSPSGSAQPGNIWVGGQKDGALATKSSANPWKK
ATASEPDLSSGDWTGVPGHAPPASVWRRGGDTVAQVMGTSNRWNVLESDAATSSRDEENK
PAPRADAGSSAGPSAAPPVSKMQPEIEVDDWEEACE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctcctccgatcggcgccgcggcggcaacggcggtggcggtggaggaggagga
ggccccgtcgcggtgccttcgtcccgcgccgtatggcggccccgctctaccgctcctcgt
gcgccaccccccgcgcccgcggccgcggccgtccccgaccgcgccgctccgatcctgccc
tttccaagtacggcttcggaggaacggcctccccagcgccgcccgcgccggaggaatcac
gggagtagcggcggccaacgccgcgccccgccgcaggagaggccgtccgcggcgccgccg
ccatcggcggcggcggctgcgccagctccgacccgcggcgcgcctcctccgcgtgcggcg
ggggcgaaggccgcggcggcagggagcgatggggcggtgccgcagctggtgcaggagatc
caggacaagctggcgcggggggcggtggagtgcatgatctgctacgacatggtgcggcgg
tcggcgccggtgtggtcctgcggcagctgcttctccattttccacctaccctgcatccgc
aagtgggcgcgctccccggcgtccgctgccgatgcgtcggacccggactcttcctggcgc
tgccccgggtgccagtccgtgcacaccgtacccgcgcgcgagctcgcctacacctgcttc
tgcgggcgacgccgcgagccccctaacgatctcttcctcacgccgcactcctgcggcgag
ccctgctccaagcccctcgagagggcggatcctgccgccgcgaagggcgcttcccccaac
gatgccgaagccaccaggtgcccgcatgtgtgtgtcctgcagtgccacccagggccttgc
ccaccctgcaaagcgtttgcaccagaccggctgtgcccctgtggcaagcagaccattgtg
cggcggtgcgcggaccggaccacgcctgtgacgtgcgggcagcagtgtgatcggctcctg
ccctgccggaggcaccgttgtgagaaggtctgccacactggaccttgcggggattgcaac
gttctcattactgcccaatgcttctgtggaaagaagacggagacattgttgtgcggggac
atggagctgaaggggaatctatctgagaaggatggagtgttctcatgcagtgaagcctgt
gaccacatgctggcgtgtgggaatcatgcctgccgagatgtttgccacccaggaccatgc
ggggagtgcgatcttatgccaggaaaggtcaccgcatgccattgtgggaagacaaggctg
ctggagaagagagagagctgcttggacccgataccaacctgtgagaaggtgtgcgacaag
aagctgccatgcggggtgcataggtgcaaggtcacatgccatgatggagagtgccctcct
tgtgtggtgcgtgtggaacagaggtgccgctgtggttcatcgggtcagatggtagagtgc
tacaaagtcttggaggaggaattccattgcaacaagccttgtgggcgaaagaaaaactgt
gggaggcacaggtgtagtgagtgctgttgcccactttcaaagccgttcgctcagcttgaa
gggggtaattgggatccccatctctgccagataccgtgtggcaagaaactgcggtgcgga
cagcatggatgccagcttctttgccatagcggccactgcccgccttgccttgagaccata
ttcaatgatctgacttgtgcatgtggtaggacatccatccctcccccgcttccttgtggc
acaccaactccatcatgcccacaccaatgcttagtcccccaaccatgtggacatccggcc
tcgcatcaatgtcattttggggattgtccgccttgtgttgttccagtaatgagagaatgc
ataggtggacatgtgatgttgaggaatatcccttgtggttctaaggatatcagatgcaac
caaccatgtggaaagaaccggcaatgtggaatacatgcttgcaccagggcttgtcatcct
gccccttgtgatgcgccgcctgcaaatggagatgctagctcaagcactggtagcagagct
tcatgtgggcaggtatgtggtgctgcaaggagggaatgtaagcacacttgcactgctcca
tgccacccatcatcaccttgcccggatttgagatgtgaatttcctgttactattacctgt
tcttgtggtcatattactgcaactgtgccatgcggtgctgggggagcttccaatggtgac
aatatgtttgaaatatccatcatacagaagctaccagtgccactccagccagtggaatcg
gatgggagaagggtaccacttgggcagaggaagctctcctgtgatgaggactgtgcaaag
atggagaggaagagggcccttgctgaagcatttgacatcaccccacccaatttggatgca
ttacattttggtgagaactcaaatgcatccgatttgctttctgatcttttccgccgtgag
ccaaaatgggtgctggccatagaggagaggtgcaagttccttgtacttgggaagacgaga
gggaattcttcaggcaacctcaaggttcatgtcttctgtcacatgatgaaggataagagg
gatgctatcaggctcattgcggacaggtggaagctttctgttcaggctgctggttgggag
cccaaacgtttcattactatccatgtcacgcccaagtcaaaaccgcctgctcgcatcctg
ggatccaagccaggagtacctgttactgcgtcccatcctttctttgatcctcttgtggac
atggatccaaggcttgttgttgcaatgctggacctcccccgggatgctgatgttagtgct
ctggttttaaggttcggtggggagtgtgaattggtttggctgaatgacaagaatgccgtg
gctgtcttcaatgatccagctagagcagcgacagcgttgaggcggctggattatgggtct
gcttaccagggtgctgctgtattttcgccaagcggcagcgctcagccaggcaatatctgg
gttggagggcagaaagatggagcattggctactaagagcagtgccaatccatggaagaag
gccactgcctctgagcctgatttatcctcaggagactggacaggtgtgcctggtcatgct
cctccagcatcagtatggaggcgtggcggtgatactgtcgctcaagtcatggggacatca
aaccgctggaacgtcctggagtctgatgctgccacaagctccagggacgaggagaataag
cctgctcctcgcgccgatgctggatccagcgcaggaccaagcgctgcaccaccggtaagt
aagatgcagccggaaatcgaagttgatgattgggaagaggcttgtgaatga
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