Oryza brachyantha (malo sina): 107305507
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Entry
107305507 CDS
T02995
Name
(RefSeq) autophagy-related protein 18d-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
107305507
Membrane trafficking [BR:
obr04131
]
Autophagy
Other autophagy associated proteins
Others
107305507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
BCAS3_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
CPSF_A
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT80_2nd
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
107305507
NCBI-ProteinID:
XP_015698983
LinkDB
All DBs
Position
1:2469462..2473437
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AA seq
437 aa
AA seq
DB search
MCVRYIRHIYNRLICLVCPHMSSQVSASRGLHSPDKLGTFESSHPWQLSASTGQGEAGSG
DDQDIRLLSVSWNQDFGCFAAGTSNGFRIFNCDPFKETFRRDLKSGGFGIVEMLFRCNIL
ALVGGGSNAHYPPNKVMIWDDHRSHCIGEFAFRSDVRAVKLGKDYIVIVLERKIYVYNFT
DLKLLHQIETQSNPKGLCCLSHHANTSVLACPGVHQGHVRVEHFGLKVTRLISAHDSHIS
CMALTMDGIILATASMKGTLIRIFNTMDGTRLQEVRRGLDKADIYSIALSPNVQWLAVSS
DKGTVHIFSLRVRVAGEDASNEQRSLEGPRMDHQNSSSSIDPLIQTNTGSNASSSLSFMK
GILPKYFSSEWSFAQFHLPEVTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVDGGQMLQKE
YFRFIKAGLTPLRPSVA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgaggtatattcgtcacatttacaacagattgatctgccttgtctgcccccac
atgagctcacaagtatctgcatcacggggtttgcactccccagacaagcttgggacattt
gagtcctctcacccatggcaactgtcagcttctacaggccagggtgaagctggtagcggt
gatgaccaggacatcaggctgttgtctgtttcttggaatcaggacttcggttgtttcgct
gctggaactagcaatggcttcaggatctttaattgtgacccttttaaagaaactttcagg
agggatctgaagagtggtgggtttgggattgttgagatgctattccgttgcaacatcctt
gctcttgtaggtggtggctccaatgcccattatccaccaaacaaggtaatgatctgggat
gaccaccggagccattgtattggagagtttgccttccgttctgatgtccgggctgtaaaa
ttggggaaggattatattgtgattgttcttgagcgcaagatatacgtttataacttcaca
gatttgaagctgctccatcagattgagacccagtccaatccaaaaggattgtgctgcctc
tctcaccatgccaatacttcagtgttggcctgccctggggtgcatcaagggcatgttcgg
gtagagcattttgggttgaaggttacaaggctgatttcagctcatgattctcacatctct
tgcatggctttgacaatggatggcatcattctggcaacagcaagcatgaagggtactttg
ataagaatattcaacacaatggatggcactcgtctgcaggaggtgcgcagaggacttgat
aaagcagacatatacagcattgcgctatcacccaacgtgcagtggttggcagtgtccagt
gacaaaggaacagttcatattttcagtctaagagtgagagttgctggggaagatgcaagt
aatgaacagcgtagtcttgaaggcccacgaatggatcaccagaactcttctagttccata
gatcctcttattcaaacaaatactggatccaatgctagctcatcgttgtcattcatgaaa
gggattctgccaaagtatttcagttcagagtggtcttttgctcagttccatttgccagaa
gtcacacgctacatagtagcttttggtgctcaaaacactgtaatgatggttggtctggat
ggcagcttctacaggtgcagctttgaccaggttgatggcgggcagatgctgcagaaggaa
tatttccggtttatcaaggctggcctcactcccctgaggccctctgtcgcctga
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