Oryza brachyantha (malo sina): 107305564
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Entry
107305564 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
107305564
04121 Ubiquitin system [BR:
obr04121
]
107305564
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107305564
Membrane trafficking [BR:
obr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107305564
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107305564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
Zf_IFT144_1st
zf-ANAPC11
zf-Nse
zf-RING_16
Prok-RING_1
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107305564
NCBI-ProteinID:
XP_040376855
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All DBs
Position
2:24594797..24596591
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AA seq
318 aa
AA seq
DB search
MSTMPAQGGVRHHRTCRMYWCYQCGRAVRIISYPSTDVFCPRCFGRFLHEIDQPPRPALP
PPHFFPQPYHPHYDGHPRRWIIYGGETPGSAFRQPPPAVPGRAFRQPAPAPTAAPAPAPT
RRRMPSPPPVARRPSNPPAIDPGDYFTGTNLNNLIEELTQNDRPGPAPAPASAIDSLPTV
RITGAHLADGSQCPVCKEDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYKLPTA
AAGSNGNGQARRGSAGNSGGGGDRNREQTIVRWGPFSWLWPPRGLEDPDDGWEYGRRGRP
EAADAGAFYAWWRSLFLF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgatgccggcgcagggcggcgtgcggcaccaccggacgtgccggatgtactgg
tgctaccagtgcggccgcgcggtccggatcatctcctacccgtccaccgacgtcttctgc
ccgcgctgcttcggcaggttcctccacgagatcgaccagccgccgcgccccgcgctcccg
ccgccgcacttcttcccgcagccttaccacccgcactacgacggccacccacgccgctgg
atcatttacggcggcgagacgccagggagcgcgttccgacagcctccacccgccgtgcca
ggacgtgcgttccgccagcccgcgcccgcgcccacggcggcgccggcgccggcaccaact
cgccgacgcatgccgtcccctccgccggtggcgaggcggccgtctaatcccccggccatc
gaccccggggactacttcacggggaccaacctgaacaacctcatcgaggagctaacccag
aacgaccggccggggccggcgcccgcgccggcgtcggccatcgactccctcccgacggtg
cggatcaccggagcgcacctcgccgacggctcgcagtgccccgtctgcaaggaggacttc
gagctcggggaggccgcgcgccagatgccgtgcaagcacgtctaccactccgactgcatc
gtgccgtggctccgcctccacaactcctgccctgtctgccggtacaagctgccaaccgcc
gccgcggggtccaacggcaacggccaggctcgccgcgggagcgccggcaacagcggcggt
ggcggtgaccggaacagggagcagacgatcgtgaggtgggggccgttctcgtggctgtgg
ccgccgcgggggctggaagaccccgacgacgggtgggagtacgggcggcggggaaggcca
gaggcggccgacgccggcgcattctacgcttggtggcgttctctgtttcttttctaa
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