Opitutaceae bacterium TAV5: OPIT5_01050
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Entry
OPIT5_01050 CDS
T03683
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OPIT5_01050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obt03400
]
OPIT5_01050
Enzymes [BR:
obt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OPIT5_01050
DNA repair and recombination proteins [BR:
obt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OPIT5_01050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
PriA_C
ResIII
Zn_ribbon_PriA
AAA_16
AAA_30
RUBY_RBDX
RecA
Motif
Other DBs
NCBI-ProteinID:
AHF89064
UniProt:
W0IXB1
LinkDB
All DBs
Position
complement(127813..130053)
Genome browser
AA seq
746 aa
AA seq
DB search
MTVGVHPLAGFDKLLHYKVPESLGAQVQVGMLVRVPILNRLRLAIVGEIDTPIDFPVAKL
KTLADIVYPFPALPPDLLQLARWMAGYYAAPLDGIIETMLPAAVRNAAGLKYEKLLSIAT
PLDPEEFARLEHRAPAQAKLYRFLRDQFRPQKKSLILARLGITAAASNALVKRGVVREEE
RRVERVAYADEWADGESVAALPHNLNDEQQAAATALVAALAARAFGVTLLHGVTGSGKTE
VYLRAIHDALADGGGVVFLVPEVALTPQTVARLRGRLEAIAPGNKVVVWHSHLNDGERMD
GWLALATGEARIVVGARSAIFAPVRTLRLIVVDEEHEPAYKQDETPRYHGRDVAVMRAKL
AGAFCLLGSATPSLETHANAKAGKYGLLRLTKRIDTRQLPHIEIVDLRIEAMQNRGFTTL
SGKLAEAMRDRFAKREQTILFLNRRGYSSAMQCRKCGHVEECPHCSVSLTYHRADETLRC
HLCGFQKTAPARCPSCAAPDIRWRGMGTQRVEEAVRRVLPDARIERMDADTMQKKNRFRQ
LLSEFRAGKIDLLVGTQMIGKGLDFPNVTLVGLVDADISMHVPDFRANERTFQLLVQVAG
RAGRGDRAGEVIVQTFTPQAGAIQFSRHADYDGFAETELKIRNDFGYPPARHLIHHLFRG
PNPEKLQFFAEQWAKLVEKELGSRVELRGPAPCPIEKIKDEYRFQLWYFINGNVSAIVAD
LSRLRATFTWPEQFVQVLDVDPVNLS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttggcgtccatcctctggccggtttcgacaagctcctgcactacaaggtgccg
gagtcgcttggcgcgcaggtgcaggtcgggatgctcgtgcgcgtgccgatcctcaaccgc
ctgcggctcgccatcgtcggcgagatcgacacgccgatcgatttcccggtcgcgaaactc
aagacgctggccgacatcgtctatccgttccccgccctgccgccggacctgctgcaactc
gcgcgctggatggccggctactacgccgcgccgctcgacggcattatcgaaaccatgctg
cccgccgccgtccgcaacgccgccgggctcaagtacgaaaaactcctctccatcgccacg
ccgctcgatccggaggagttcgcccggctcgaacaccgcgcccccgcccaggcgaaactc
taccgtttcctgcgcgaccagtttcggccgcagaaaaaatcgctcattcttgcccgcctc
ggcatcaccgccgccgccagcaacgcgctcgtgaaacgcggcgtggtccgcgaggaagaa
cgccgtgtcgagcgcgtggcctacgccgacgaatgggctgacggcgaatccgtggccgcg
ctcccgcacaacctcaacgacgaacagcaggccgccgccaccgcgctcgtcgccgcgctc
gccgcacgcgccttcggcgtcacgctgctgcacggcgtcaccggctcgggcaagacggag
gtttacctgcgcgccatccacgatgcgctggcggatggcggcggcgtggtgtttctcgtg
cccgaagtggccctgaccccgcaaaccgtcgcccggctgcgcggtcgcctcgaagccatc
gcgccgggcaacaaggttgtggtctggcacagccatctcaacgacggcgaacgcatggac
ggctggctcgcgctcgcgaccggcgaggcccgcatcgttgtcggcgcgcgctcggctatc
ttcgcccccgtgcgcactctccgcctcatcgtcgtggacgaggagcacgaacccgcctac
aagcaggacgaaaccccgcgttaccacgggcgcgacgtcgccgtgatgcgcgccaagctc
gccggcgcgttctgcctgctcggctcggccacgccctcgctcgaaacccatgccaacgcg
aaggccggcaagtacgggctcctccggctcacgaagcgcatcgacacgcgccagcttccg
cacatcgagattgtcgatctgcggatcgaggccatgcagaaccgcggcttcacgacgctc
tccggaaaactcgccgaggccatgcgcgaccgcttcgcgaaacgcgagcagacgatcctc
ttcctcaatcgccgcggttactccagcgccatgcagtgccgcaaatgcggccacgtcgag
gagtgcccgcattgcagcgtgtcgctcacctaccaccgcgccgacgagacgctgcgctgc
cacctctgcggctttcagaaaaccgcccccgcccgctgcccctcgtgcgctgcgcccgac
atccgctggcgcggcatgggcacgcaacgcgtggaggaagccgtccgccgcgtgctgccc
gatgcgcgtatcgaaagaatggatgcggacacgatgcagaaaaagaaccgcttccggcaa
ctcctctccgagtttcgcgccggcaagatcgacctgctcgtgggcacgcagatgatcggc
aaggggctcgattttcccaacgtcacgctcgtcgggctcgtcgatgccgacatctcgatg
cacgtcccggatttccgcgccaacgaacgcaccttccagcttctcgtgcaggtggccggc
cgcgccgggcgcggcgacagggcaggggaggtgatcgtgcagaccttcacgccgcaggcc
ggcgcgatccagttttcgcgacatgccgattacgacggcttcgcggagaccgaattaaag
atccggaacgatttcggttacccgcccgcgcgtcatctgatccatcatctcttccgcgga
ccgaatccggaaaagctgcaattcttcgccgagcagtgggcgaagctcgtcgagaaggaa
ctcggttcgcgggtcgagctgcgcggccccgcgccatgcccgatcgagaagataaaggac
gagtaccgtttccagctctggtatttcatcaacggcaacgtcagcgccatcgtcgccgac
ctctcgcgcctgcgggcgacgtttacctggcccgagcaatttgtgcaggtgctcgacgtg
gacccggtcaatctgagctga
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