Opitutaceae bacterium TAV5: OPIT5_01865
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Entry
OPIT5_01865 CDS
T03683
Name
(GenBank) Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OPIT5_01865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obt03000
]
OPIT5_01865
Transcription factors [BR:
obt03000
]
Prokaryotic type
Helix-turn-helix
Other families
OPIT5_01865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA_2
bpMoxR
AAA
Mg_chelatase
HTH_50
RsgA_GTPase
IstB_IS21
AAA_16
nSTAND3
AAA_7
AAA_3
Parvo_NS1
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHF89186
UniProt:
W0IXF6
LinkDB
All DBs
Position
complement(333731..335386)
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AA seq
551 aa
AA seq
DB search
MCGNEHGIPDVNECHEGVCRHNDPRVKECHAGVCRGKFVPLLFEIGRAVSKKNDLSRALD
TLLDYMGRNMGIRRAMINLHHRESGQIFIHKSMGLTEAEQARGVYFPGEGITGQVVELAK
PLVVPRIGSEPAFLNRTGMLSAEEERDSAFICIPILRGKKVLGSISAIRRYEHEELLHKH
VDALVVVSDMLAQAVELYLIENVDKVRWEQRQRALIGELKERYKPSNIIGSSRAMMEVFA
LLHKVAQTRTTVLLLGESGVGKELIANAIHYDGASSEGPMIRFNCAALPESILESELFGH
EKGAFTGAEHTRKGRFEEADGGTIFLDEVGELSLAVQAKLLRVLQERSFERVGGNRTVTV
NIRVVAATNKDLAEMVARGTFRQDLYFRLNVFPLMIPPLRDRGSDIITLAEHFVARFARA
NGKTINRITTPVINMLMNYHWPGNVRELENVIERAVILTEDDAIHGYHLPLSLQAPVFSR
ADIPNGLEARLAAIEYEMLTEALRLHHGNTSEAARELGLTRRTMGLRMAKYKLSYRAFRR
GEAAAPAPVAG
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggcaacgagcatgggatccctgatgtgaacgagtgccatgaaggcgtttgccgg
cataacgatccccgggtgaaggagtgtcatgccggggtttgccgggggaagtttgtgccg
ttgcttttcgagatagggagggccgtatcgaagaaaaacgacctctcccgggcgctcgac
acgctcctcgattacatgggcaggaacatgggcatcaggcgggccatgatcaatctgcac
catcgggagagcggccagattttcattcacaagtccatggggttgaccgaggcagagcag
gccaggggcgtgtatttcccgggcgagggcatcaccggacaggttgtcgagctggccaaa
cctctcgtcgtgccgcgcatcggctccgagccggctttcctgaaccggaccggcatgttg
tccgcggaggaagagcgtgacagtgccttcatctgcataccgatcttgcgggggaaaaag
gtgctcgggagcatcagcgccatccggcgttacgagcacgaggaattgctgcacaagcat
gtggacgccctcgtggtcgtttccgacatgctggcgcaggcggtcgagctttatctcatc
gaaaatgtcgacaaggtccgctgggaacagcgccagcgcgcactcatcggcgagttgaag
gagcgttacaagccgtcgaatatcatcggctcgtcgcgggccatgatggaggtgttcgcc
ctgttgcacaaggtggcgcagacccggaccacggtgctgctgctcggggaaagcggcgtg
ggcaaggaactcatcgcaaatgcgatccactacgacggcgccagttccgaagggccgatg
atcaggttcaactgcgccgccctccccgagagtattctcgaaagcgaacttttcggccat
gagaagggggccttcaccggtgcggagcacacccgcaagggacgtttcgaggaggcggac
ggagggacgattttcctcgacgaggtcggcgaattgtcgctcgccgtccaggcgaaactg
ttgcgggtattgcaggaaaggtccttcgagcgcgtggggggcaaccggaccgtgacggtg
aacattcgcgtggtggccgccaccaacaaggacctggccgagatggtcgcgaggggaact
ttccggcaggatctttatttccggctcaacgtattcccgttgatgataccgcccctgcgc
gaccgcggcagcgacatcatcaccctggcggagcacttcgtggcacggttcgccagggcg
aacggaaaaacaatcaaccggatcaccacgccggtgatcaacatgctcatgaattatcac
tggccgggcaacgtccgcgaactggagaatgtcatcgaacgtgcggtgatcctgaccgaa
gacgatgccatccacgggtatcatctgccgctctcgttgcaggcgcctgtcttttcccgg
gctgatattcccaacggcctggaggccaggcttgcggcgatcgaatatgaaatgctgacg
gaggcgctgcgtctgcatcacggcaatacaagcgaggcggcccgggaactgggcctgacc
cgccggaccatgggcctgcgcatggcgaaatacaaactcagctaccgggcgtttcgccgg
ggcgaagccgcggccccggcgccggtggcggggtag
DBGET
integrated database retrieval system
