Opitutaceae bacterium TAV5: OPIT5_05890
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Entry
OPIT5_05890 CDS
T03683
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obt03009
]
OPIT5_05890
Enzymes [BR:
obt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
OPIT5_05890
Ribosome biogenesis [BR:
obt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OPIT5_05890
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
XPB_DRD
hSac2
Motif
Other DBs
NCBI-ProteinID:
AHF89833
UniProt:
W0IYM7
LinkDB
All DBs
Position
complement(1275327..1276049)
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AA seq
240 aa
AA seq
DB search
MKRRLDQLLASLGYCSRREAREFLRAHAVTAGGGPPLRDAALKLDPGAADVRVDGEPLDH
PDGLLILLNKPTGLVCSHDEREGPRVYDLLPPRWRARNPQVTSIGRLDKETSGLLLLTDR
TELVHRYTSPRHKVEKVYRATLDRSIAGIAEKLAATFASGTLQLDGEKTPCAAAKFCLID
DRTATLTLTEGKYHQVRRMFAAAAGATVVALHRERFGALTPGDLAPGEYRLIGENEIGGE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgcctcgaccagctcctcgccagcctcggctactgctcgcgccgcgaagcg
cgggagtttttgcgcgcccatgccgtgacggccggtggcggcccgccgttgcgtgatgca
gccctgaagctcgatcccggcgccgccgatgtacgcgtggacggcgagccgctcgatcat
cccgacggcctgctgatcctgctgaacaagccgaccggtctggtgtgctcgcacgacgag
cgcgaagggccgcgcgtgtacgacctgctcccgccgcgctggcgcgcccgcaacccgcag
gtgacgagcatcggccgcctcgacaaggagacaagcggcctgctcctgctcaccgaccgc
acggaactcgttcaccgttatacctcgccgaggcacaaggtcgaaaaggtctatcgcgcc
acgctcgaccgctccatcgccggcatcgcggaaaaactcgccgccacgtttgcctccggc
acgctgcaactcgacggagagaagacaccgtgcgcggcggcgaagttttgtttgatcgac
gaccgcaccgccacgctgacgctgaccgaaggcaagtaccaccaggtgcgccgcatgttc
gccgcggccgccggggcgacggtcgtggcgctgcatcgcgaacgtttcggcgcgctcact
cccggcgacctcgcgcccggcgaataccggctgatcggggagaacgaaatcggcggcgag
tga
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integrated database retrieval system
