Opitutaceae bacterium TAV5: OPIT5_12880
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Entry
OPIT5_12880 CDS
T03683
Name
(GenBank) hypothetical protein
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obt03000
]
OPIT5_12880
Transcription factors [BR:
obt03000
]
Prokaryotic type
Helix-turn-helix
LacI family
OPIT5_12880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
IMPDH
Motif
Other DBs
NCBI-ProteinID:
AHF94348
LinkDB
All DBs
Position
complement(2954067..2955029)
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AA seq
320 aa
AA seq
DB search
MTAARILAGSSRRSKNRDRVLDCAKKLGYVRNQNAANLRTGRSRIIGIMVPFIDNPFYTK
FLQEMHNALAARQYQCLIGCSFGESASMQATINLFGTYNVDGLVLDISEGAMTGEIEKQL
KQARQRSRPVVITGAQQHDIPHDHLYLDNKRAIAKVIRHLVSRGHRSIGFLGGLADNLNI
KNRLEGFSTALEKAGLPAEPAWISQGNPSLDSVAQRAHQLLRAKSRPTAIVCTSDMIAMV
AIKAALENGLRIPQDIAITGFDDIAQASLLNPGLTTVRQPLKAMVSDIVTLLLRHLEAES
DIPTLQKQQYEAELVIREST
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcgcggattcttgccggctccagccgccgctcaaaaaacagggaccgggtg
ctggattgcgccaaaaaactgggatacgtccgcaaccagaatgcggcaaatctacgcacc
ggacgctcccggatcatcgggatcatggttccttttatcgacaatcccttttacaccaaa
ttcttgcaggagatgcacaacgccctggcagcgcgccagtatcagtgcctgatcggctgt
tccttcggcgaaagcgccagtatgcaggccaccatcaatctgttcggaacctacaatgtg
gatggactggttctggacataagtgaaggcgcgatgaccggggagatcgaaaaacagctg
aagcaggcccggcaacggtcccgcccggtcgtcatcaccggagcccagcagcacgacatt
ccccacgaccacctttacctcgataacaagcgggccattgccaaggtgatccgccacctt
gtcagccggggacaccgctccatcggctttctcggcgggctggccgacaacctgaacatc
aagaatcgccttgaaggcttcagcaccgccctggaaaaggccggactgccagcggagccg
gcctggatctcgcaaggcaacccttcgctcgacagcgtcgcccagcgcgcccaccagctg
ctgcgcgccaaatcgcgccccacggcaatcgtctgcacaagcgacatgatagcgatggtc
gccatcaaggcggcgctggaaaacggcctgcgcatcccgcaagacattgccatcacagga
tttgacgacatcgcccaagccagcctcctcaatcccggactcacgacggtcaggcaaccc
ctgaaggcaatggtatctgatatcgttaccctgttgctccgccatctggaagcggaatcc
gacatccccaccttacaaaaacagcagtatgaggcagaactggtgatccgcgaatccacc
tga
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