Opitutaceae bacterium TAV5: OPIT5_13845
Help
Entry
OPIT5_13845 CDS
T03683
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OPIT5_13845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obt03400
]
OPIT5_13845
Enzymes [BR:
obt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OPIT5_13845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OPIT5_13845
DNA repair and recombination proteins [BR:
obt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OPIT5_13845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AHF91128
UniProt:
W0J2A4
LinkDB
All DBs
Position
complement(3187608..3188441)
Genome browser
AA seq
277 aa
AA seq
DB search
MPELAEVEFFRKRWNRGLGAPVLQVKLHPAARVFRGCDVPALRQSLTGAVLEDSRAAGKQ
MIFRFRSASASGGNAWLGIHLGMTGRLRADDASRYHAEAADHLVLVQEEAALVFNDPRMF
GRVQFAAGAEPPAWWTSIAPAMLSDEFTADAVAAFLRRRARAPVKAVLLMQERFPGIGNW
MADEILWRAGIHPRQPAGSLSPATVRKLWREIRWVAEQAMQTIGETCEDPPATWLFPHRW
EDGGRCPRTGVPLVREQIGGRTTCWSPGRQKLSPESV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcgccgaagtcgaatttttccgcaaacgctggaaccgcgggctgggagcg
cccgtcctgcaagtgaaactgcatccggccgctcgtgtgtttcgcggatgcgatgtaccg
gcgttgcgccagagcctcaccggcgcggtgctcgaagactcccgggccgccggcaagcag
atgatcttccgcttccgttccgcgtccgcttccggcggaaatgcctggctcggtattcac
ctcggcatgacgggccggctgcgggccgacgacgcctcccgttatcatgccgaagccgcc
gatcatctcgtgctggtgcaggaagaagcggcgctggtgttcaacgatccgcggatgttt
ggccgcgtgcagttcgccgccggcgcggagccgcccgcgtggtggacctccatcgctccc
gccatgctttcggatgagttcacagcggatgccgtggccgcgttcctgcgccgccgggcg
cgcgctccggtcaaggccgtgctcctgatgcaggagcgttttcccggcatcggcaactgg
atggccgacgagattctctggcgcgccggcatccatccgcgccagcccgccggctcgctc
tcgcccgcgacggtccgcaaactctggcgcgaaatccgctgggtggccgaacaggcgatg
cagaccatcggcgagacctgcgaagacccgccggcgacctggcttttcccccaccggtgg
gaggacggcgggcgctgcccgcgcaccggcgtgccgctcgtccgcgaacagatcggcggc
cgcaccacctgctggtcgccgggacgacagaagctctcgccggagtccgtgtga
DBGET
integrated database retrieval system
