Opitutaceae bacterium TAV5: OPIT5_14640
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Entry
OPIT5_14640 CDS
T03683
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OPIT5_14640 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obt01007
]
OPIT5_14640 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obt03016
]
OPIT5_14640 (lysS)
Enzymes [BR:
obt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
OPIT5_14640 (lysS)
Amino acid related enzymes [BR:
obt01007
]
Aminoacyl-tRNA synthetase
Class II (A)
OPIT5_14640 (lysS)
Transfer RNA biogenesis [BR:
obt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OPIT5_14640 (lysS)
Prokaryotic type
Other AARSs
OPIT5_14640 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AHF91268
UniProt:
W0J2N5
LinkDB
All DBs
Position
complement(3400435..3401925)
Genome browser
AA seq
496 aa
AA seq
DB search
MSEAPQHEDISHDQHAVRRQKLADLRAAGQDPFRAHFEPTHFSAEALKAYVDGEDNTVPV
AVAGRLVTIRVQGGSAFVKILDQQGQIQLYVRRDVIGEAAYAEFKKLDLGDFIGARGTLF
KTKTGEITVRADSYTLVSKALRPLPEKWHGLSDPEQVYRQRYLDLIVNPESRARLQLRSK
IVTHIRRFLEDRDFLEVETPVLQNVAGGAAARPFETHHNALGVDFVLRISLELYLKRMLV
GGFDRVFEIGRNFRNEGVSRRHNPEFTMLEVYQAYSDYRGMMTLVRDLFQSLCRDVLGTF
EIKHAASGETIHFAGEWREVRYKDLIREATGDPDWFSRSKEQKIAGAQKLGLYADPKWED
YEITNEIFSKKIEPTLIQPTFVTHLPKELCPLAKLNLEDPSVIDVFELTIGGMEIAPAYS
EQNDPDVQRQMFEAQAGEDIQKIDTDFLLALEHGMPPAGGMGIGIDRLCILLTGAESIRD
VILFPQLRPGGATAGN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacctcagcacgaagacatctcccacgaccagcacgccgttcgccgccag
aaactcgccgacctgcgcgctgccggccaggacccgttccgcgcccatttcgagcccacc
cacttctccgccgaagcgctcaaggcctacgttgacggcgaggacaacaccgtccctgtc
gccgtcgccggccgcctcgtcaccatccgcgtccagggcggcagcgcctttgtcaagatc
ctcgaccagcagggccagatccagctctacgtccgccgcgacgtcatcggcgaggccgcc
tacgccgagttcaagaagctcgacctcggtgattttatcggcgccaggggcacgctcttc
aagacaaagaccggcgagatcaccgttcgcgccgacagctacacgctcgtcagcaaggcc
ctccgcccgctccccgaaaagtggcacggcctcagcgatcccgagcaggtttaccgccag
cgctacctcgacctgatcgtcaaccccgagtcgcgcgcccggctccagctccgctcgaaa
atcgtcacgcacatccgccgcttcctcgaagaccgcgacttcctcgaagtcgagacaccc
gtcctccagaacgtggccggcggcgccgccgcgcgtcctttcgagacgcaccacaacgcg
ctcggcgtcgatttcgtgctccgcatctcgctcgaactttacctgaagcgcatgctcgtc
ggcggtttcgaccgcgtctttgaaatcggtcgcaacttccgcaacgaaggcgtctcccgc
cgccacaatcccgagttcaccatgctcgaggtgtatcaggcctacagcgactaccgcggc
atgatgacactcgtccgcgacctgttccagtcgctctgccgcgacgtcctcggcaccttc
gagatcaagcacgccgccagcggcgaaacgatccactttgccggcgagtggcgcgaagtc
cgctacaaggacctcatccgcgaagccaccggcgaccccgactggttcagccgcagcaag
gaacaaaaaatcgccggcgcgcaaaagctcggcctctacgccgacccgaagtgggaagac
tacgagatcaccaacgaaatcttttccaagaaaatcgagcccacgctcatccagcccacc
ttcgtcacccacctgccgaaggagctttgcccgctcgccaaactcaacctcgaggacccg
tccgtcatcgacgtgttcgagctcaccatcggcggcatggaaatcgcgcccgcctactcc
gagcagaacgatcccgacgtgcagcgccagatgttcgaggcgcaggccggcgaggatatc
cagaaaatcgataccgattttctcctcgcgctcgaacacggcatgccgcccgccggcggc
atgggcatcggtatcgaccgcctctgcatcctcctcaccggagccgaaagcatccgcgac
gtgatcctgttcccgcagttgcgcccggggggcgcaactgcgggaaattaa
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