Opitutaceae bacterium TAV5: OPIT5_15110
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Entry
OPIT5_15110 CDS
T03683
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obt03400
]
OPIT5_15110
Enzymes [BR:
obt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OPIT5_15110
DNA repair and recombination proteins [BR:
obt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OPIT5_15110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF3799
Motif
Other DBs
NCBI-ProteinID:
AHF91342
UniProt:
W0IYQ9
LinkDB
All DBs
Position
complement(3523540..3526632)
Genome browser
AA seq
1030 aa
AA seq
DB search
MPAVPRLHSLSWKKPLAPAAAAWLVGDREDRGPLDLSDTLVIVPTAQSGRRLREALAVLA
AARGQAVFPPHVVSPERFITELLPPSPPAESSGFRVQGSGFPITEPVTKPETPNSKPETP
NPKPGGEAAPATPVESLLAWIEVLDAIDLDDFRAVFPVDPPARNFAWSSRLAREFQRLQA
TLAENALRMGDVTARAGDDFPETVRWQQLGRLEAVYDAALARRGLRDGQLAKITAATSGM
PPSTITRIAVIATPDPLPLALRSLDRLAASAASAVTLHILVHGPESAAGLSALFDHYGRP
RPDAWTRRPLDLPDFKQHVRLCEDPAAQAAAIVSYAGQYESADGVLAIGIADGEITPLVE
SGLARAGIPSHNPEGRPHRAGALHALLTALADLARERDPAFPSVAALARCPDILHWLRSR
HRADWSAARFLAALDNLHAAHLPPTLSVAREHAAAAGNISLAADLDAIAALARQLLAPPF
PSGLDATLADLFSAREFDLARPDDARTVEAAGAWRDALAATTAALRRFPRIAPADAFDLA
LRAFGDATLPEEKSPRAIDLQGWLELPWDDTPHLVIAGLNDGRVPEAVNGDAFLPESLRE
RLGLKTNAARFARDAYLLQTLVYSRGQRPEDRGQRTEVREQTSATTTAGSPDSGLRPLAS
GLSSTGRLDLLVGKTSAAGDPLRPSRLLLQCADADLPGRVLYLFGTPPSGRASLAWRRAW
KLAPRTDAPIEKLSVTAFRDYLRCPFRFYLKHALRMRAVDPDKAELDALDFGNLCHAALE
AMGRPESGLRDCADPALLRDFLLDRLEACARATWGEQLPLPLVVQLESARQRLSRAAGEQ
ARLRAEGWLIERTEYPVDLVIGGLPVRGKIDRIDRNETTGAIRVLDYKTSDSAVNPVDAH
LRKPRRNDSPDTLPPWTLFSGTGTAGSLLWTDLQLPLYLRAVAPEYGDAVACGYFNLPKA
IGETRVSEWLDYTPATQRAADTCAEGIVAAIAARRFWPPAELTAAEAAYDDYAALFHNGA
ADSIEWPCEQ
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgttccgcgccttcacagtctgtcctggaaaaagcccctcgcacccgccgcg
gcggcctggctcgtcggcgaccgggaggatcgcggacccctcgatctctccgacaccctc
gtcatcgtgccgaccgcgcagtccggccgccgccttcgcgaagccctcgccgtcctggcc
gccgcccgcggccaggccgtcttcccgccccacgtcgtctcgcccgaacgcttcatcacc
gaactcctcccgccctcgcctccggcggagagttcagggttcagggttcagggttcaggg
ttcccgatcacagaacctgtcacgaaacccgaaaccccaaactccaaacccgaaacccca
aacccgaaaccgggcggcgaagccgcccccgccacccccgtcgagtcgcttctcgcctgg
atcgaagtgctcgacgccatcgacctcgacgatttccgcgccgttttccccgtcgacccg
cccgcgcgcaatttcgcctggtcctcgcgcctcgcccgcgaattccagcgtctccaggcc
acgctggccgagaacgccctccgcatgggcgacgtcaccgcccgcgccggcgacgacttt
cccgaaaccgtccgctggcaacagctcggccggctcgaagccgtgtacgacgccgccctc
gcccgccgcggcctccgcgacggacagctcgccaagatcaccgcggccacctccggcatg
ccgccttccacgatcacccgtatcgccgtcatcgccacgcccgatccgctcccgctcgcc
cttcgctcgctcgaccggctcgcggcctccgctgcgtccgcagtcaccttgcacatcctc
gtgcacggcccggagtccgccgccgggctctccgcgctctttgaccattacggacgcccc
cggcccgacgcctggacccgccgcccgctcgaccttcccgatttcaaacagcacgtacgc
ctctgcgaggaccccgccgcccaggccgcggccatcgtgtcatatgccggccaatacgaa
tcggccgacggtgtcctcgccatcggcatcgccgatggcgagatcactccgctcgtcgaa
tccgggctcgcccgcgccggcatcccttcccacaaccccgaaggccgcccccaccgcgcc
ggcgcgcttcacgccctgctcaccgcgctcgccgacctcgcccgcgaacgcgaccccgcg
ttcccgtccgtcgccgcgctcgcccgctgccccgatatccttcactggcttcgctcgcgc
catcgcgccgactggtccgccgcccgctttctcgccgcgctcgacaatctccacgccgcc
cacctgccccccacgctctccgtcgcccgcgaacacgctgccgctgccggcaatatttcc
ctcgccgccgacctcgacgccatcgccgccctcgcccgccagctcctcgcgcctcccttt
ccttccggactcgacgccaccctcgccgacctgttttcggcacgcgaattcgacctcgcc
cgccccgacgatgcccgcaccgtcgaagccgccggcgcctggcgcgatgccctcgccgcc
accaccgccgccctccgccgcttcccccgcatcgctcctgccgacgccttcgacctcgcc
ctccgcgccttcggcgatgctacccttcccgaagaaaaatccccccgcgccatcgacctc
cagggctggctcgaactcccgtgggacgacaccccgcatctcgtcatcgccggtctcaac
gacggccgcgtcccggaagccgtcaacggcgacgcgttcctccccgaatccctccgcgaa
cgcctcggcctcaagaccaacgccgcccgcttcgcccgcgacgcgtacctcctgcaaacc
ctcgtctactccagaggacagaggccagaggacagaggccagaggacagaagtcagagaa
cagacttcggctacgacaactgctggctctccggattctggcctccggcctctggcctct
ggcctctcctccactggccgcctcgacctgctcgtcggcaagacctccgccgccggcgac
ccgctccgcccctcgcgtcttcttctccagtgcgccgacgccgacctccccggtcgcgtc
ctctatctcttcggcacgcctccctccggccgcgccagcctcgcctggcgccgagcctgg
aaactcgctccgcgcaccgacgctcccatcgaaaaactctccgtcaccgcgttccgcgac
tacttgcgctgccccttccgcttctacctcaaacacgccctccgcatgcgtgccgtcgac
ccggacaaagccgaactcgacgccctcgatttcggcaatctctgccacgccgcgctcgaa
gccatgggccgccccgaatccggcctgcgcgactgcgccgacccggccctcctccgcgat
ttcctgctcgaccggctcgaagcctgcgcccgcgccacgtggggcgaacagctcccgctc
cccctcgttgtccaactcgaatccgcccgccagcgcctttcgcgcgccgccggggagcag
gcccgccttcgcgccgaaggctggctcatcgaacgcaccgaataccccgtcgatctcgtc
atcggcggcctccccgtccgcggaaaaatcgaccgcatcgatcgcaacgaaaccaccggc
gccatccgcgtgctcgactacaaaacctccgactcggccgtgaatccggtcgacgcccat
ctccgcaaaccccgccgtaacgattcaccggatacgctcccgccctggacgctcttctcc
ggcaccggcaccgctggctctctcctctggaccgacctgcaactccctctctacctccgc
gccgtcgctcccgagtatggcgacgccgtcgcctgcggttatttcaacctccccaaagcc
atcggtgaaacccgcgtcagcgaatggctcgactacacgcccgccacccaacgcgccgcc
gacacctgcgccgaaggcattgtcgccgccatcgccgcccgccgtttctggccccccgcc
gaactcaccgccgccgaagccgcgtacgacgactacgccgccctcttccacaacggcgcc
gccgacagcatcgaatggccctgcgaacaatga
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