Opitutaceae bacterium TAV5: OPIT5_15345
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Entry
OPIT5_15345 CDS
T03683
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt03030
DNA replication
obt03430
Mismatch repair
obt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OPIT5_15345
03430 Mismatch repair
OPIT5_15345
03440 Homologous recombination
OPIT5_15345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obt03032
]
OPIT5_15345
03400 DNA repair and recombination proteins [BR:
obt03400
]
OPIT5_15345
Enzymes [BR:
obt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OPIT5_15345
DNA replication proteins [BR:
obt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OPIT5_15345
DNA repair and recombination proteins [BR:
obt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OPIT5_15345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHF91387
LinkDB
All DBs
Position
complement(3581398..3581997)
Genome browser
AA seq
199 aa
AA seq
DB search
MDLVIFDLETTGFSPRWHDIIQIAAVRLRDGRTPGETFSTYVRPRCPVPESITDLTGITD
ADVADAPGTPDALRAFARFVAGENGRENTTLLAHNGHRFDMRFIAESCAQHGLPTCPVRF
IDSIWLSKKCWPAESLHNLDVIVERLGIDPGETGHRRHDARADVHLLANAVRHMLRRLRP
EEATGSPLIEPCLRDFMDA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgtcatcttcgacctcgaaaccaccggcttttcgccccgctggcacgacatc
atccagatcgccgccgtgcgactgcgcgacgggcgcactccgggtgaaacgttctcgacc
tacgtccgcccgcgttgtccggtccccgaatccatcaccgatctgaccggcatcaccgac
gccgacgtcgccgatgctcccgggacacccgacgccctgcgggccttcgcccgctttgta
gccggggaaaacggccgtgaaaacaccacgctcctcgcgcacaacggccaccggttcgac
atgcgtttcatcgcggaaagctgcgcgcaacacggactccccacgtgtcccgtccgtttt
atcgacagcatctggttgtcgaaaaaatgctggcccgccgagtccctgcacaatctcgac
gtgatcgtcgaacgcctcggcatcgacccgggtgaaaccggccatcgccgccacgacgcc
cgcgccgacgtccacctgctggcgaacgcagtccgccacatgctccggagacttcgcccg
gaggaagctaccggatcgcccctcatcgagccttgcctccgggacttcatggacgcctga
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